Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl6P27784 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl6P27784 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl6P27784 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl6P27784 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl6P27784 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.13□□□□□ -0.47
Ccl6P27784 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ccl6P27784 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ccl6P27784 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl6P27784 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl6P27784 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Ccl6P27784 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl6P27784 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl6P27784 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl6P27784 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl6P27784 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl6P27784 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl6P27784 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl6P27784 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl6P27784 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl6P27784 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Ccl6P27784 Rprl3-201ENSMUST00000157400 290 ntBASIC12.13□□□□□ -0.47
Ccl6P27784 Gm17807-201ENSMUST00000186869 298 ntBASIC12.13□□□□□ -0.47
Ccl6P27784 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.13□□□□□ -0.47
Ccl6P27784 Gm21362-201ENSMUST00000194272 928 ntBASIC12.13□□□□□ -0.47
Ccl6P27784 Gm44454-201ENSMUST00000198541 138 ntBASIC12.13□□□□□ -0.47
Ccl6P27784 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl6P27784 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Ccl6P27784 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl6P27784 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl6P27784 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl6P27784 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl6P27784 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl6P27784 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Ccl6P27784 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Ccl6P27784 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl6P27784 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl6P27784 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl6P27784 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl6P27784 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl6P27784 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl6P27784 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl6P27784 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl6P27784 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl6P27784 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl6P27784 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl6P27784 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl6P27784 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl6P27784 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Ccl6P27784 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl6P27784 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl6P27784 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.12□□□□□ -0.47
Ccl6P27784 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl6P27784 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Ccl6P27784 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ccl6P27784 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.12□□□□□ -0.47
Ccl6P27784 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl6P27784 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.12□□□□□ -0.47
Ccl6P27784 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.12□□□□□ -0.47
Ccl6P27784 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl6P27784 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl6P27784 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl6P27784 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl6P27784 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl6P27784 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl6P27784 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl6P27784 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ccl6P27784 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl6P27784 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl6P27784 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl6P27784 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl6P27784 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl6P27784 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl6P27784 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl6P27784 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccl6P27784 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl6P27784 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl6P27784 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccl6P27784 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl6P27784 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl6P27784 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.11□□□□□ -0.47
Ccl6P27784 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Ccl6P27784 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl6P27784 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl6P27784 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl6P27784 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl6P27784 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl6P27784 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl6P27784 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccl6P27784 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl6P27784 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl6P27784 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl6P27784 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl6P27784 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccl6P27784 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl6P27784 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccl6P27784 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl6P27784 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.11□□□□□ -0.47
Ccl6P27784 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl6P27784 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms