Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6aP27664 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6aP27664 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6aP27664 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6aP27664 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6aP27664 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pde6aP27664 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6aP27664 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6aP27664 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.97■□□□□ 0.47
Pde6aP27664 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6aP27664 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Pde6aP27664 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6aP27664 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6aP27664 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6aP27664 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6aP27664 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6aP27664 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Pde6aP27664 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6aP27664 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6aP27664 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6aP27664 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6aP27664 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6aP27664 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6aP27664 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pde6aP27664 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pde6aP27664 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Pde6aP27664 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pde6aP27664 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pde6aP27664 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pde6aP27664 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Pde6aP27664 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pde6aP27664 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pde6aP27664 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.96■□□□□ 0.47
Pde6aP27664 Gm18489-201ENSMUST00000172565 551 ntBASIC17.96■□□□□ 0.47
Pde6aP27664 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.96■□□□□ 0.47
Pde6aP27664 Gm9682-201ENSMUST00000197505 556 ntBASIC17.96■□□□□ 0.47
Pde6aP27664 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pde6aP27664 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.96■□□□□ 0.47
Pde6aP27664 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pde6aP27664 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pde6aP27664 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Pde6aP27664 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Pde6aP27664 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Pde6aP27664 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pde6aP27664 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pde6aP27664 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6aP27664 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6aP27664 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.95■□□□□ 0.46
Pde6aP27664 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6aP27664 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6aP27664 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6aP27664 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6aP27664 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6aP27664 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6aP27664 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.95■□□□□ 0.46
Pde6aP27664 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.95■□□□□ 0.46
Pde6aP27664 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6aP27664 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.95■□□□□ 0.46
Pde6aP27664 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.95■□□□□ 0.46
Pde6aP27664 Gm18733-201ENSMUST00000173950 856 ntBASIC17.95■□□□□ 0.46
Pde6aP27664 Gm27628-201ENSMUST00000184911 107 ntBASIC17.95■□□□□ 0.46
Pde6aP27664 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.95■□□□□ 0.46
Pde6aP27664 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6aP27664 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6aP27664 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6aP27664 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6aP27664 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.95■□□□□ 0.46
Pde6aP27664 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6aP27664 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6aP27664 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.95■□□□□ 0.46
Pde6aP27664 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6aP27664 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Pde6aP27664 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pde6aP27664 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Pde6aP27664 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Pde6aP27664 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.94■□□□□ 0.46
Pde6aP27664 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pde6aP27664 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pde6aP27664 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pde6aP27664 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pde6aP27664 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pde6aP27664 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.94■□□□□ 0.46
Pde6aP27664 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pde6aP27664 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pde6aP27664 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.94■□□□□ 0.46
Pde6aP27664 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.94■□□□□ 0.46
Pde6aP27664 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.94■□□□□ 0.46
Pde6aP27664 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.94■□□□□ 0.46
Pde6aP27664 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.94■□□□□ 0.46
Pde6aP27664 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.94■□□□□ 0.46
Pde6aP27664 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.94■□□□□ 0.46
Pde6aP27664 Gm45167-201ENSMUST00000208007 322 ntBASIC17.94■□□□□ 0.46
Pde6aP27664 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.94■□□□□ 0.46
Pde6aP27664 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pde6aP27664 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Pde6aP27664 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pde6aP27664 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pde6aP27664 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Pde6aP27664 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Pde6aP27664 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms