Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf1aP25118 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf1aP25118 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Tnfrsf1aP25118 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf1aP25118 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf1aP25118 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf1aP25118 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf1aP25118 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf1aP25118 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf1aP25118 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf1aP25118 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Tnfrsf1aP25118 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf1aP25118 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf1aP25118 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.03□□□□□ -0.32
Tnfrsf1aP25118 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf1aP25118 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Tnfrsf1aP25118 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.03□□□□□ -0.32
Tnfrsf1aP25118 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.03□□□□□ -0.32
Tnfrsf1aP25118 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Tnfrsf1aP25118 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf1aP25118 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.03□□□□□ -0.32
Tnfrsf1aP25118 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf1aP25118 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf1aP25118 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfrsf1aP25118 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfrsf1aP25118 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfrsf1aP25118 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfrsf1aP25118 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.02□□□□□ -0.32
Tnfrsf1aP25118 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfrsf1aP25118 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfrsf1aP25118 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfrsf1aP25118 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Tnfrsf1aP25118 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Tnfrsf1aP25118 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf1aP25118 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf1aP25118 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.02□□□□□ -0.33
Tnfrsf1aP25118 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Tnfrsf1aP25118 Gm27742-201ENSMUST00000184667 60 ntBASIC13.02□□□□□ -0.33
Tnfrsf1aP25118 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Tnfrsf1aP25118 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.02□□□□□ -0.33
Tnfrsf1aP25118 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf1aP25118 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf1aP25118 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Tnfrsf1aP25118 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf1aP25118 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf1aP25118 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf1aP25118 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf1aP25118 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf1aP25118 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf1aP25118 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf1aP25118 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf1aP25118 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Tnfrsf1aP25118 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf1aP25118 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.01□□□□□ -0.33
Tnfrsf1aP25118 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.01□□□□□ -0.33
Tnfrsf1aP25118 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1aP25118 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1aP25118 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Tnfrsf1aP25118 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1aP25118 Gm25406-201ENSMUST00000157599 105 ntBASIC13.01□□□□□ -0.33
Tnfrsf1aP25118 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1aP25118 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1aP25118 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1aP25118 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1aP25118 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1aP25118 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1aP25118 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Tnfrsf1aP25118 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1aP25118 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1aP25118 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Tnfrsf1aP25118 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1aP25118 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.01□□□□□ -0.33
Tnfrsf1aP25118 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1aP25118 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.01□□□□□ -0.33
Tnfrsf1aP25118 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1aP25118 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1aP25118 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.01□□□□□ -0.33
Tnfrsf1aP25118 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Tnfrsf1aP25118 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Mir3081-201ENSMUST00000175305 84 ntBASIC13□□□□□ -0.33
Tnfrsf1aP25118 Gm21362-201ENSMUST00000194272 928 ntBASIC13□□□□□ -0.33
Tnfrsf1aP25118 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1aP25118 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms