Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp53P15975 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp53P15975 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp53P15975 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp53P15975 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp53P15975 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp53P15975 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp53P15975 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.94■□□□□ 0.46
Usp53P15975 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp53P15975 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp53P15975 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp53P15975 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.94■□□□□ 0.46
Usp53P15975 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.94■□□□□ 0.46
Usp53P15975 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.94■□□□□ 0.46
Usp53P15975 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp53P15975 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp53P15975 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.94■□□□□ 0.46
Usp53P15975 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Usp53P15975 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp53P15975 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp53P15975 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Usp53P15975 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp53P15975 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp53P15975 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp53P15975 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp53P15975 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp53P15975 Prob1-201ENSMUST00000097619 3021 ntBASIC17.93■□□□□ 0.46
Usp53P15975 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.93■□□□□ 0.46
Usp53P15975 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp53P15975 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Usp53P15975 Gm25911-201ENSMUST00000157621 56 ntBASIC17.93■□□□□ 0.46
Usp53P15975 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.93■□□□□ 0.46
Usp53P15975 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Usp53P15975 Gm10175-201ENSMUST00000086013 645 ntBASIC17.93■□□□□ 0.46
Usp53P15975 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Usp53P15975 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp53P15975 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp53P15975 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp53P15975 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp53P15975 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.92■□□□□ 0.46
Usp53P15975 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp53P15975 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Usp53P15975 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Usp53P15975 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp53P15975 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp53P15975 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp53P15975 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp53P15975 Gm8318-201ENSMUST00000182954 872 ntBASIC17.92■□□□□ 0.46
Usp53P15975 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.92■□□□□ 0.46
Usp53P15975 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.92■□□□□ 0.46
Usp53P15975 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.92■□□□□ 0.46
Usp53P15975 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.92■□□□□ 0.46
Usp53P15975 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.92■□□□□ 0.46
Usp53P15975 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp53P15975 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp53P15975 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp53P15975 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp53P15975 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Usp53P15975 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp53P15975 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.91■□□□□ 0.46
Usp53P15975 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Usp53P15975 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp53P15975 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp53P15975 Gm17968-201ENSMUST00000194902 784 ntBASIC17.91■□□□□ 0.46
Usp53P15975 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.91■□□□□ 0.46
Usp53P15975 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.91■□□□□ 0.46
Usp53P15975 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp53P15975 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp53P15975 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp53P15975 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp53P15975 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp53P15975 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Usp53P15975 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Usp53P15975 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp53P15975 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp53P15975 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp53P15975 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.9■□□□□ 0.46
Usp53P15975 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.9■□□□□ 0.46
Usp53P15975 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Usp53P15975 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp53P15975 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Usp53P15975 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Usp53P15975 Mir3113-201ENSMUST00000175478 76 ntBASIC17.9■□□□□ 0.46
Usp53P15975 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.9■□□□□ 0.46
Usp53P15975 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.9■□□□□ 0.46
Usp53P15975 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Usp53P15975 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp53P15975 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Usp53P15975 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp53P15975 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp53P15975 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp53P15975 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.9■□□□□ 0.46
Usp53P15975 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.9■□□□□ 0.46
Usp53P15975 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp53P15975 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.9■□□□□ 0.46
Usp53P15975 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp53P15975 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Usp53P15975 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Usp53P15975 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Usp53P15975 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms