Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rb1P13405 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
Rb1P13405 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rb1P13405 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.88■□□□□ 0.13
Rb1P13405 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rb1P13405 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rb1P13405 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rb1P13405 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rb1P13405 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rb1P13405 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rb1P13405 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.88■□□□□ 0.13
Rb1P13405 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rb1P13405 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rb1P13405 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.88■□□□□ 0.13
Rb1P13405 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.88■□□□□ 0.13
Rb1P13405 Gm7506-201ENSMUST00000207758 815 ntBASIC15.88■□□□□ 0.13
Rb1P13405 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Rb1P13405 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Rb1P13405 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rb1P13405 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rb1P13405 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.88■□□□□ 0.13
Rb1P13405 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rb1P13405 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rb1P13405 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rb1P13405 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rb1P13405 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Rb1P13405 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Rb1P13405 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rb1P13405 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Rb1P13405 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rb1P13405 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rb1P13405 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rb1P13405 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rb1P13405 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rb1P13405 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.87■□□□□ 0.13
Rb1P13405 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rb1P13405 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rb1P13405 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rb1P13405 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rb1P13405 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Rb1P13405 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rb1P13405 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.87■□□□□ 0.13
Rb1P13405 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.87■□□□□ 0.13
Rb1P13405 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.87■□□□□ 0.13
Rb1P13405 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rb1P13405 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.87■□□□□ 0.13
Rb1P13405 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Rb1P13405 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rb1P13405 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rb1P13405 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rb1P13405 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rb1P13405 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rb1P13405 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.87■□□□□ 0.13
Rb1P13405 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rb1P13405 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rb1P13405 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rb1P13405 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rb1P13405 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Rb1P13405 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rb1P13405 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rb1P13405 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rb1P13405 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rb1P13405 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rb1P13405 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rb1P13405 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rb1P13405 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.87■□□□□ 0.13
Rb1P13405 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rb1P13405 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rb1P13405 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rb1P13405 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Rb1P13405 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rb1P13405 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rb1P13405 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rb1P13405 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.86■□□□□ 0.13
Rb1P13405 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.86■□□□□ 0.13
Rb1P13405 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.86■□□□□ 0.13
Rb1P13405 Gm15173-201ENSMUST00000122049 433 ntBASIC15.86■□□□□ 0.13
Rb1P13405 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.86■□□□□ 0.13
Rb1P13405 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Rb1P13405 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rb1P13405 Gm6089-201ENSMUST00000197666 938 ntBASIC15.86■□□□□ 0.13
Rb1P13405 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.86■□□□□ 0.13
Rb1P13405 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.86■□□□□ 0.13
Rb1P13405 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rb1P13405 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rb1P13405 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rb1P13405 Gm15590-201ENSMUST00000078419 552 ntBASIC15.86■□□□□ 0.13
Rb1P13405 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rb1P13405 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Rb1P13405 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rb1P13405 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Rb1P13405 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Rb1P13405 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rb1P13405 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rb1P13405 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rb1P13405 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Rb1P13405 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rb1P13405 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rb1P13405 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.86■□□□□ 0.13
Rb1P13405 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms