Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Hoxc6P10629 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Hoxc6P10629 Gm14722-201ENSMUST00000118943 689 ntBASIC17.19■□□□□ 0.34
Hoxc6P10629 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.19■□□□□ 0.34
Hoxc6P10629 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.19■□□□□ 0.34
Hoxc6P10629 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc6P10629 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc6P10629 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc6P10629 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.19■□□□□ 0.34
Hoxc6P10629 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.19■□□□□ 0.34
Hoxc6P10629 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc6P10629 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Hoxc6P10629 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.19■□□□□ 0.34
Hoxc6P10629 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc6P10629 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc6P10629 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc6P10629 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc6P10629 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc6P10629 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc6P10629 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc6P10629 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Hoxc6P10629 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Hoxc6P10629 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Hoxc6P10629 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Hoxc6P10629 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.18■□□□□ 0.34
Hoxc6P10629 Gm27622-201ENSMUST00000183779 60 ntBASIC17.18■□□□□ 0.34
Hoxc6P10629 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc6P10629 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc6P10629 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Hoxc6P10629 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc6P10629 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc6P10629 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.18■□□□□ 0.34
Hoxc6P10629 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc6P10629 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.18■□□□□ 0.34
Hoxc6P10629 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc6P10629 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc6P10629 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc6P10629 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc6P10629 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc6P10629 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc6P10629 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc6P10629 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc6P10629 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc6P10629 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.17■□□□□ 0.34
Hoxc6P10629 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Hoxc6P10629 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc6P10629 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc6P10629 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.17■□□□□ 0.34
Hoxc6P10629 Gm24158-201ENSMUST00000175263 71 ntBASIC17.17■□□□□ 0.34
Hoxc6P10629 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.17■□□□□ 0.34
Hoxc6P10629 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.17■□□□□ 0.34
Hoxc6P10629 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.17■□□□□ 0.34
Hoxc6P10629 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc6P10629 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc6P10629 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.17■□□□□ 0.34
Hoxc6P10629 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc6P10629 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc6P10629 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.17■□□□□ 0.34
Hoxc6P10629 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.17■□□□□ 0.34
Hoxc6P10629 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc6P10629 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc6P10629 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc6P10629 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Hoxc6P10629 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc6P10629 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Hoxc6P10629 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc6P10629 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc6P10629 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc6P10629 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.16■□□□□ 0.34
Hoxc6P10629 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.16■□□□□ 0.34
Hoxc6P10629 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc6P10629 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc6P10629 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.16■□□□□ 0.34
Hoxc6P10629 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc6P10629 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc6P10629 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc6P10629 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc6P10629 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc6P10629 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Hoxc6P10629 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Hoxc6P10629 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc6P10629 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Hoxc6P10629 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc6P10629 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc6P10629 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.15■□□□□ 0.34
Hoxc6P10629 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxc6P10629 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxc6P10629 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxc6P10629 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxc6P10629 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Hoxc6P10629 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxc6P10629 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxc6P10629 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.15■□□□□ 0.34
Hoxc6P10629 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxc6P10629 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.15■□□□□ 0.34
Hoxc6P10629 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxc6P10629 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.15■□□□□ 0.34
Hoxc6P10629 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.15■□□□□ 0.34
Hoxc6P10629 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.15■□□□□ 0.34
Hoxc6P10629 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms