Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ApoeP08226 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ApoeP08226 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ApoeP08226 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ApoeP08226 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ApoeP08226 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
ApoeP08226 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ApoeP08226 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ApoeP08226 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.71□□□□□ -0.05
ApoeP08226 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ApoeP08226 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
ApoeP08226 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.71□□□□□ -0.05
ApoeP08226 Gm30025-201ENSMUST00000218555 728 ntBASIC14.71□□□□□ -0.05
ApoeP08226 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.71□□□□□ -0.05
ApoeP08226 Gm7367-201ENSMUST00000057611 492 ntBASIC14.71□□□□□ -0.05
ApoeP08226 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ApoeP08226 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ApoeP08226 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ApoeP08226 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ApoeP08226 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ApoeP08226 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
ApoeP08226 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
ApoeP08226 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
ApoeP08226 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
ApoeP08226 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
ApoeP08226 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
ApoeP08226 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
ApoeP08226 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
ApoeP08226 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ApoeP08226 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ApoeP08226 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
ApoeP08226 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
ApoeP08226 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ApoeP08226 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ApoeP08226 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.7□□□□□ -0.06
ApoeP08226 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.7□□□□□ -0.06
ApoeP08226 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.7□□□□□ -0.06
ApoeP08226 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ApoeP08226 Gm5417-201ENSMUST00000079706 384 ntBASIC14.7□□□□□ -0.06
ApoeP08226 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
ApoeP08226 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ApoeP08226 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ApoeP08226 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ApoeP08226 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
ApoeP08226 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
ApoeP08226 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
ApoeP08226 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ApoeP08226 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ApoeP08226 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ApoeP08226 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ApoeP08226 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ApoeP08226 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ApoeP08226 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ApoeP08226 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ApoeP08226 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ApoeP08226 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
ApoeP08226 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ApoeP08226 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
ApoeP08226 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ApoeP08226 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ApoeP08226 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
ApoeP08226 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
ApoeP08226 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ApoeP08226 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
ApoeP08226 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ApoeP08226 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ApoeP08226 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.69□□□□□ -0.06
ApoeP08226 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
ApoeP08226 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.69□□□□□ -0.06
ApoeP08226 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.69□□□□□ -0.06
ApoeP08226 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.69□□□□□ -0.06
ApoeP08226 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ApoeP08226 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ApoeP08226 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
ApoeP08226 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.69□□□□□ -0.06
ApoeP08226 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ApoeP08226 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ApoeP08226 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
ApoeP08226 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ApoeP08226 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ApoeP08226 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.68□□□□□ -0.06
ApoeP08226 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ApoeP08226 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ApoeP08226 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.68□□□□□ -0.06
ApoeP08226 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ApoeP08226 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ApoeP08226 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.68□□□□□ -0.06
ApoeP08226 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ApoeP08226 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.68□□□□□ -0.06
ApoeP08226 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ApoeP08226 Gm37722-201ENSMUST00000193757 208 ntBASIC14.68□□□□□ -0.06
ApoeP08226 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
ApoeP08226 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ApoeP08226 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.68□□□□□ -0.06
ApoeP08226 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ApoeP08226 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ApoeP08226 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ApoeP08226 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ApoeP08226 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ApoeP08226 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms