Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
P01852 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P01852 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
P01852 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
P01852 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.21□□□□□ -0.14
P01852 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.21□□□□□ -0.14
P01852 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
P01852 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
P01852 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.21□□□□□ -0.14
P01852 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P01852 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P01852 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P01852 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.2□□□□□ -0.14
P01852 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
P01852 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P01852 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
P01852 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.2□□□□□ -0.14
P01852 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.2□□□□□ -0.14
P01852 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
P01852 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
P01852 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.2□□□□□ -0.14
P01852 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
P01852 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
P01852 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
P01852 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.2□□□□□ -0.14
P01852 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.2□□□□□ -0.14
P01852 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
P01852 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P01852 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
P01852 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
P01852 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P01852 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P01852 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P01852 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P01852 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P01852 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
P01852 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
P01852 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P01852 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P01852 Gm8344-201ENSMUST00000119813 856 ntBASIC14.19□□□□□ -0.14
P01852 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.19□□□□□ -0.14
P01852 Gm11780-201ENSMUST00000136880 516 ntBASIC14.19□□□□□ -0.14
P01852 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
P01852 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.19□□□□□ -0.14
P01852 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
P01852 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.19□□□□□ -0.14
P01852 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.19□□□□□ -0.14
P01852 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
P01852 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P01852 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P01852 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
P01852 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
P01852 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.19□□□□□ -0.14
P01852 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
P01852 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
P01852 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
P01852 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P01852 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P01852 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
P01852 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
P01852 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P01852 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.18□□□□□ -0.14
P01852 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
P01852 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
P01852 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P01852 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P01852 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
P01852 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P01852 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
P01852 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
P01852 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P01852 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.18□□□□□ -0.14
P01852 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
P01852 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P01852 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
P01852 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
P01852 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
P01852 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P01852 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
P01852 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.17□□□□□ -0.14
P01852 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
P01852 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
P01852 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.17□□□□□ -0.14
P01852 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
P01852 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P01852 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.17□□□□□ -0.14
P01852 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms