Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.94■□□□□ 0.14
Syn1O88935 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Syn1O88935 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Syn1O88935 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Syn1O88935 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Syn1O88935 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Syn1O88935 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syn1O88935 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syn1O88935 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syn1O88935 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.93■□□□□ 0.14
Syn1O88935 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syn1O88935 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syn1O88935 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Syn1O88935 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.93■□□□□ 0.14
Syn1O88935 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Syn1O88935 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syn1O88935 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syn1O88935 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.93■□□□□ 0.14
Syn1O88935 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Syn1O88935 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syn1O88935 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syn1O88935 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syn1O88935 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syn1O88935 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syn1O88935 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Syn1O88935 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syn1O88935 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Syn1O88935 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Syn1O88935 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Syn1O88935 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Syn1O88935 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Syn1O88935 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Syn1O88935 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Syn1O88935 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Syn1O88935 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Syn1O88935 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Syn1O88935 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Syn1O88935 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Syn1O88935 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.92■□□□□ 0.14
Syn1O88935 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Syn1O88935 Gm6415-201ENSMUST00000118488 348 ntBASIC15.92■□□□□ 0.14
Syn1O88935 Gm16215-201ENSMUST00000161990 637 ntBASIC15.92■□□□□ 0.14
Syn1O88935 Gm44855-201ENSMUST00000205725 362 ntBASIC15.92■□□□□ 0.14
Syn1O88935 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.92■□□□□ 0.14
Syn1O88935 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Syn1O88935 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Syn1O88935 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Syn1O88935 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Syn1O88935 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Syn1O88935 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Syn1O88935 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syn1O88935 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syn1O88935 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syn1O88935 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syn1O88935 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syn1O88935 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Syn1O88935 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.91■□□□□ 0.14
Syn1O88935 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Syn1O88935 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syn1O88935 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Syn1O88935 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Syn1O88935 Gm13453-201ENSMUST00000118708 357 ntBASIC15.91■□□□□ 0.14
Syn1O88935 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.91■□□□□ 0.14
Syn1O88935 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.91■□□□□ 0.14
Syn1O88935 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Syn1O88935 Gm19164-201ENSMUST00000210667 640 ntBASIC15.91■□□□□ 0.14
Syn1O88935 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Syn1O88935 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Syn1O88935 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syn1O88935 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syn1O88935 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syn1O88935 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Syn1O88935 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syn1O88935 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syn1O88935 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syn1O88935 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Syn1O88935 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syn1O88935 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Syn1O88935 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syn1O88935 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Syn1O88935 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Syn1O88935 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Syn1O88935 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Syn1O88935 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Syn1O88935 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Syn1O88935 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Syn1O88935 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Syn1O88935 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Syn1O88935 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.9■□□□□ 0.14
Syn1O88935 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Syn1O88935 Gm13216-201ENSMUST00000117145 591 ntBASIC15.9■□□□□ 0.14
Syn1O88935 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Syn1O88935 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Syn1O88935 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.9■□□□□ 0.14
Syn1O88935 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Syn1O88935 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Syn1O88935 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.9■□□□□ 0.14
Syn1O88935 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Syn1O88935 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Syn1O88935 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms