Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Apaf1O88879 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Apaf1O88879 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Apaf1O88879 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Apaf1O88879 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Apaf1O88879 Gm42918-201ENSMUST00000199249 1580 ntBASIC20.16■□□□□ 0.82
Apaf1O88879 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Apaf1O88879 Gm16011-201ENSMUST00000121567 2662 ntBASIC20.16■□□□□ 0.82
Apaf1O88879 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Apaf1O88879 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Apaf1O88879 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Apaf1O88879 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
Apaf1O88879 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.15■□□□□ 0.82
Apaf1O88879 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Apaf1O88879 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Apaf1O88879 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
Apaf1O88879 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC20.15■□□□□ 0.82
Apaf1O88879 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC20.15■□□□□ 0.82
Apaf1O88879 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC20.15■□□□□ 0.82
Apaf1O88879 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC20.15■□□□□ 0.82
Apaf1O88879 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Apaf1O88879 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Apaf1O88879 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Apaf1O88879 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Apaf1O88879 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Apaf1O88879 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Apaf1O88879 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Apaf1O88879 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Apaf1O88879 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Apaf1O88879 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC20.14■□□□□ 0.82
Apaf1O88879 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Apaf1O88879 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Apaf1O88879 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC20.14■□□□□ 0.81
Apaf1O88879 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC20.14■□□□□ 0.81
Apaf1O88879 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC20.14■□□□□ 0.81
Apaf1O88879 Gm11873-201ENSMUST00000117877 1304 ntBASIC20.14■□□□□ 0.81
Apaf1O88879 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Apaf1O88879 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Apaf1O88879 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Apaf1O88879 Gm43332-201ENSMUST00000202511 1044 ntBASIC20.14■□□□□ 0.81
Apaf1O88879 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Apaf1O88879 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Apaf1O88879 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Apaf1O88879 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Apaf1O88879 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Apaf1O88879 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Apaf1O88879 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Apaf1O88879 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Apaf1O88879 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Apaf1O88879 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Apaf1O88879 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Apaf1O88879 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Apaf1O88879 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Apaf1O88879 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Apaf1O88879 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Apaf1O88879 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC20.13■□□□□ 0.81
Apaf1O88879 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Apaf1O88879 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Apaf1O88879 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Apaf1O88879 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Apaf1O88879 AC131586.3-201ENSMUST00000228355 1367 ntBASIC20.13■□□□□ 0.81
Apaf1O88879 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Apaf1O88879 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Apaf1O88879 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Apaf1O88879 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Apaf1O88879 Gm9727-201ENSMUST00000161387 555 ntBASIC20.13■□□□□ 0.81
Apaf1O88879 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC20.13■□□□□ 0.81
Apaf1O88879 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Apaf1O88879 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Apaf1O88879 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Apaf1O88879 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC20.13■□□□□ 0.81
Apaf1O88879 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Apaf1O88879 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Apaf1O88879 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
Apaf1O88879 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Apaf1O88879 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Apaf1O88879 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Apaf1O88879 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Apaf1O88879 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Apaf1O88879 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Apaf1O88879 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Apaf1O88879 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC20.12■□□□□ 0.81
Apaf1O88879 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Apaf1O88879 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Apaf1O88879 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Apaf1O88879 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Apaf1O88879 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Apaf1O88879 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Apaf1O88879 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC20.12■□□□□ 0.81
Apaf1O88879 Gm12260-201ENSMUST00000122447 411 ntBASIC20.12■□□□□ 0.81
Apaf1O88879 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Apaf1O88879 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Apaf1O88879 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Apaf1O88879 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Apaf1O88879 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC20.12■□□□□ 0.81
Apaf1O88879 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Apaf1O88879 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Apaf1O88879 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Apaf1O88879 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Apaf1O88879 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms