Protein–RNA interactions for Protein: O88573

Aff1, AF4/FMR2 family member 1, mousemouse

Predictions only

Length 1,216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aff1O88573 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Aff1O88573 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.61■□□□□ 0.25
Aff1O88573 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Aff1O88573 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Aff1O88573 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Aff1O88573 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Aff1O88573 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Aff1O88573 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Aff1O88573 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Aff1O88573 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Aff1O88573 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.61■□□□□ 0.25
Aff1O88573 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.61■□□□□ 0.25
Aff1O88573 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Aff1O88573 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Aff1O88573 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Aff1O88573 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.6■□□□□ 0.25
Aff1O88573 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Aff1O88573 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Aff1O88573 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Aff1O88573 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Aff1O88573 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Aff1O88573 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.6■□□□□ 0.25
Aff1O88573 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Aff1O88573 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.6■□□□□ 0.25
Aff1O88573 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Aff1O88573 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Aff1O88573 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Aff1O88573 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Aff1O88573 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.6■□□□□ 0.25
Aff1O88573 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Aff1O88573 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Aff1O88573 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Aff1O88573 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Aff1O88573 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.6■□□□□ 0.25
Aff1O88573 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Aff1O88573 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Aff1O88573 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Aff1O88573 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Aff1O88573 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.6■□□□□ 0.25
Aff1O88573 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Aff1O88573 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.6■□□□□ 0.25
Aff1O88573 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aff1O88573 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aff1O88573 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aff1O88573 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aff1O88573 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aff1O88573 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aff1O88573 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aff1O88573 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aff1O88573 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aff1O88573 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aff1O88573 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aff1O88573 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Aff1O88573 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.59■□□□□ 0.25
Aff1O88573 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Aff1O88573 Gm5186-201ENSMUST00000218781 920 ntBASIC16.59■□□□□ 0.25
Aff1O88573 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.59■□□□□ 0.25
Aff1O88573 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aff1O88573 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aff1O88573 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.59■□□□□ 0.25
Aff1O88573 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aff1O88573 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Aff1O88573 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aff1O88573 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Aff1O88573 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aff1O88573 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aff1O88573 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aff1O88573 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Aff1O88573 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Aff1O88573 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Aff1O88573 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Aff1O88573 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aff1O88573 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aff1O88573 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Aff1O88573 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Aff1O88573 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Aff1O88573 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Aff1O88573 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Aff1O88573 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Aff1O88573 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Aff1O88573 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Aff1O88573 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Aff1O88573 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Aff1O88573 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.58■□□□□ 0.24
Aff1O88573 Gm4459-201ENSMUST00000118750 468 ntBASIC16.58■□□□□ 0.24
Aff1O88573 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.58■□□□□ 0.24
Aff1O88573 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Aff1O88573 Mir3113-201ENSMUST00000175478 76 ntBASIC16.58■□□□□ 0.24
Aff1O88573 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.58■□□□□ 0.24
Aff1O88573 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Aff1O88573 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Aff1O88573 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Aff1O88573 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Aff1O88573 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Aff1O88573 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Aff1O88573 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.58■□□□□ 0.24
Aff1O88573 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Aff1O88573 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Aff1O88573 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Aff1O88573 Asic1-205ENSMUST00000228185 1818 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms