Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1bO88384 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1bO88384 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1bO88384 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1bO88384 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Vti1bO88384 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1bO88384 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1bO88384 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1bO88384 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1bO88384 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1bO88384 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1bO88384 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.83□□□□□ -0.03
Vti1bO88384 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vti1bO88384 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
Vti1bO88384 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Vti1bO88384 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vti1bO88384 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vti1bO88384 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Vti1bO88384 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.83□□□□□ -0.04
Vti1bO88384 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vti1bO88384 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vti1bO88384 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.83□□□□□ -0.04
Vti1bO88384 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vti1bO88384 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vti1bO88384 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.83□□□□□ -0.04
Vti1bO88384 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.83□□□□□ -0.04
Vti1bO88384 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.83□□□□□ -0.04
Vti1bO88384 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Vti1bO88384 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Vti1bO88384 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vti1bO88384 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vti1bO88384 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vti1bO88384 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Vti1bO88384 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vti1bO88384 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.83□□□□□ -0.04
Vti1bO88384 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vti1bO88384 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.83□□□□□ -0.04
Vti1bO88384 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vti1bO88384 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vti1bO88384 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vti1bO88384 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vti1bO88384 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vti1bO88384 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vti1bO88384 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.82□□□□□ -0.04
Vti1bO88384 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vti1bO88384 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vti1bO88384 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Vti1bO88384 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vti1bO88384 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vti1bO88384 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vti1bO88384 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vti1bO88384 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Vti1bO88384 Gm27742-201ENSMUST00000184667 60 ntBASIC14.82□□□□□ -0.04
Vti1bO88384 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vti1bO88384 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vti1bO88384 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vti1bO88384 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vti1bO88384 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vti1bO88384 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vti1bO88384 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vti1bO88384 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vti1bO88384 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Vti1bO88384 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vti1bO88384 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Vti1bO88384 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Vti1bO88384 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vti1bO88384 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vti1bO88384 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vti1bO88384 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vti1bO88384 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vti1bO88384 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vti1bO88384 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vti1bO88384 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.81□□□□□ -0.04
Vti1bO88384 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vti1bO88384 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vti1bO88384 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vti1bO88384 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.81□□□□□ -0.04
Vti1bO88384 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Vti1bO88384 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vti1bO88384 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Vti1bO88384 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vti1bO88384 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vti1bO88384 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vti1bO88384 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.81□□□□□ -0.04
Vti1bO88384 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vti1bO88384 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vti1bO88384 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vti1bO88384 Gm7284-201ENSMUST00000131667 944 ntBASIC14.81□□□□□ -0.04
Vti1bO88384 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vti1bO88384 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.81□□□□□ -0.04
Vti1bO88384 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vti1bO88384 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vti1bO88384 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vti1bO88384 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Vti1bO88384 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vti1bO88384 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Vti1bO88384 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vti1bO88384 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Vti1bO88384 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.81□□□□□ -0.04
Vti1bO88384 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms