Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna4O70174 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna4O70174 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Chrna4O70174 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna4O70174 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna4O70174 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna4O70174 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.68■□□□□ 0.1
Chrna4O70174 Gm11780-201ENSMUST00000136880 516 ntBASIC15.68■□□□□ 0.1
Chrna4O70174 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna4O70174 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.68■□□□□ 0.1
Chrna4O70174 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna4O70174 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna4O70174 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.68■□□□□ 0.1
Chrna4O70174 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna4O70174 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna4O70174 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna4O70174 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna4O70174 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna4O70174 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna4O70174 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna4O70174 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna4O70174 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna4O70174 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna4O70174 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna4O70174 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna4O70174 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna4O70174 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Chrna4O70174 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna4O70174 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chrna4O70174 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna4O70174 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna4O70174 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna4O70174 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna4O70174 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.67■□□□□ 0.1
Chrna4O70174 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna4O70174 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna4O70174 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Chrna4O70174 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Chrna4O70174 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.67■□□□□ 0.1
Chrna4O70174 Gm13418-201ENSMUST00000119097 944 ntBASIC15.67■□□□□ 0.1
Chrna4O70174 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.67■□□□□ 0.1
Chrna4O70174 Gm4535-201ENSMUST00000182274 558 ntBASIC15.67■□□□□ 0.1
Chrna4O70174 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.67■□□□□ 0.1
Chrna4O70174 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna4O70174 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna4O70174 Gm10355-201ENSMUST00000097146 517 ntBASIC15.67■□□□□ 0.1
Chrna4O70174 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna4O70174 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna4O70174 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna4O70174 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna4O70174 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna4O70174 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna4O70174 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
Chrna4O70174 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna4O70174 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Chrna4O70174 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chrna4O70174 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna4O70174 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.66■□□□□ 0.1
Chrna4O70174 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna4O70174 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna4O70174 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna4O70174 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Chrna4O70174 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.66■□□□□ 0.1
Chrna4O70174 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.66■□□□□ 0.1
Chrna4O70174 Gm27646-201ENSMUST00000183989 110 ntBASIC15.66■□□□□ 0.1
Chrna4O70174 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.66■□□□□ 0.1
Chrna4O70174 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.66■□□□□ 0.1
Chrna4O70174 Gm6296-201ENSMUST00000222599 943 ntBASIC15.66■□□□□ 0.1
Chrna4O70174 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna4O70174 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna4O70174 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna4O70174 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna4O70174 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna4O70174 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna4O70174 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna4O70174 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chrna4O70174 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Chrna4O70174 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Chrna4O70174 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Chrna4O70174 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna4O70174 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna4O70174 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna4O70174 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna4O70174 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna4O70174 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna4O70174 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna4O70174 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna4O70174 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna4O70174 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna4O70174 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna4O70174 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna4O70174 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna4O70174 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.65■□□□□ 0.1
Chrna4O70174 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna4O70174 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Chrna4O70174 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.65■□□□□ 0.1
Chrna4O70174 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chrna4O70174 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Chrna4O70174 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Chrna4O70174 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms