Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trdmt1O55055 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trdmt1O55055 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trdmt1O55055 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Trdmt1O55055 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.04■□□□□ 0.32
Trdmt1O55055 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trdmt1O55055 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trdmt1O55055 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trdmt1O55055 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trdmt1O55055 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trdmt1O55055 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trdmt1O55055 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trdmt1O55055 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.04■□□□□ 0.32
Trdmt1O55055 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trdmt1O55055 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trdmt1O55055 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Trdmt1O55055 Gm7774-201ENSMUST00000200064 533 ntBASIC17.04■□□□□ 0.32
Trdmt1O55055 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.04■□□□□ 0.32
Trdmt1O55055 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trdmt1O55055 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trdmt1O55055 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trdmt1O55055 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trdmt1O55055 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trdmt1O55055 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trdmt1O55055 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.03■□□□□ 0.32
Trdmt1O55055 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trdmt1O55055 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trdmt1O55055 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trdmt1O55055 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.03■□□□□ 0.32
Trdmt1O55055 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.03■□□□□ 0.32
Trdmt1O55055 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trdmt1O55055 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trdmt1O55055 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.03■□□□□ 0.32
Trdmt1O55055 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.03■□□□□ 0.32
Trdmt1O55055 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trdmt1O55055 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trdmt1O55055 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trdmt1O55055 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trdmt1O55055 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trdmt1O55055 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trdmt1O55055 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trdmt1O55055 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trdmt1O55055 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trdmt1O55055 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trdmt1O55055 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trdmt1O55055 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Trdmt1O55055 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trdmt1O55055 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.02■□□□□ 0.32
Trdmt1O55055 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trdmt1O55055 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trdmt1O55055 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Trdmt1O55055 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trdmt1O55055 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trdmt1O55055 Gm10253-201ENSMUST00000194270 940 ntBASIC17.02■□□□□ 0.32
Trdmt1O55055 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trdmt1O55055 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trdmt1O55055 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trdmt1O55055 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trdmt1O55055 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trdmt1O55055 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trdmt1O55055 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trdmt1O55055 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trdmt1O55055 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trdmt1O55055 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trdmt1O55055 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Trdmt1O55055 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.02■□□□□ 0.31
Trdmt1O55055 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.02■□□□□ 0.31
Trdmt1O55055 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.02■□□□□ 0.31
Trdmt1O55055 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trdmt1O55055 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Trdmt1O55055 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trdmt1O55055 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trdmt1O55055 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.01■□□□□ 0.31
Trdmt1O55055 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Trdmt1O55055 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trdmt1O55055 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trdmt1O55055 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trdmt1O55055 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trdmt1O55055 Gm25287-201ENSMUST00000103846 110 ntBASIC17.01■□□□□ 0.31
Trdmt1O55055 Gm22918-201ENSMUST00000103855 110 ntBASIC17.01■□□□□ 0.31
Trdmt1O55055 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trdmt1O55055 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trdmt1O55055 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trdmt1O55055 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.01■□□□□ 0.31
Trdmt1O55055 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.01■□□□□ 0.31
Trdmt1O55055 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trdmt1O55055 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trdmt1O55055 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.01■□□□□ 0.31
Trdmt1O55055 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trdmt1O55055 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trdmt1O55055 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.01■□□□□ 0.31
Trdmt1O55055 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trdmt1O55055 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trdmt1O55055 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trdmt1O55055 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Trdmt1O55055 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trdmt1O55055 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trdmt1O55055 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trdmt1O55055 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trdmt1O55055 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms