Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SncaO55042 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.88□□□□□ -0.35
SncaO55042 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SncaO55042 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SncaO55042 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SncaO55042 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SncaO55042 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SncaO55042 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
SncaO55042 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SncaO55042 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SncaO55042 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SncaO55042 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SncaO55042 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
SncaO55042 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SncaO55042 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SncaO55042 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SncaO55042 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SncaO55042 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SncaO55042 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SncaO55042 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SncaO55042 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SncaO55042 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SncaO55042 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SncaO55042 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SncaO55042 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
SncaO55042 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
SncaO55042 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.87□□□□□ -0.35
SncaO55042 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SncaO55042 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SncaO55042 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SncaO55042 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SncaO55042 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SncaO55042 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.87□□□□□ -0.35
SncaO55042 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SncaO55042 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.87□□□□□ -0.35
SncaO55042 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SncaO55042 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
SncaO55042 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SncaO55042 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SncaO55042 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SncaO55042 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SncaO55042 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SncaO55042 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SncaO55042 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SncaO55042 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SncaO55042 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SncaO55042 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SncaO55042 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SncaO55042 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.86□□□□□ -0.35
SncaO55042 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SncaO55042 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SncaO55042 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SncaO55042 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SncaO55042 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SncaO55042 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SncaO55042 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SncaO55042 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SncaO55042 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.86□□□□□ -0.35
SncaO55042 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SncaO55042 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SncaO55042 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.86□□□□□ -0.35
SncaO55042 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SncaO55042 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.86□□□□□ -0.35
SncaO55042 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.86□□□□□ -0.35
SncaO55042 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.86□□□□□ -0.35
SncaO55042 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.86□□□□□ -0.35
SncaO55042 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SncaO55042 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SncaO55042 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SncaO55042 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SncaO55042 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SncaO55042 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SncaO55042 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
SncaO55042 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SncaO55042 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SncaO55042 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SncaO55042 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SncaO55042 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SncaO55042 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
SncaO55042 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
SncaO55042 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
SncaO55042 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SncaO55042 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SncaO55042 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SncaO55042 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SncaO55042 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SncaO55042 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SncaO55042 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SncaO55042 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SncaO55042 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.85□□□□□ -0.35
SncaO55042 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
SncaO55042 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SncaO55042 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SncaO55042 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SncaO55042 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SncaO55042 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SncaO55042 Mir770-201ENSMUST00000103252 94 ntBASIC12.85□□□□□ -0.35
SncaO55042 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.85□□□□□ -0.35
SncaO55042 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SncaO55042 Mir6982-201ENSMUST00000184354 68 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms