Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cntnap1O54991 Gm45784-201ENSMUST00000188360 142 ntBASIC19.8■□□□□ 0.76
Cntnap1O54991 AC140451.2-201ENSMUST00000228030 664 ntBASIC19.8■□□□□ 0.76
Cntnap1O54991 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
Cntnap1O54991 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cntnap1O54991 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cntnap1O54991 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cntnap1O54991 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cntnap1O54991 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cntnap1O54991 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC19.79■□□□□ 0.76
Cntnap1O54991 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cntnap1O54991 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cntnap1O54991 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Cntnap1O54991 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cntnap1O54991 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cntnap1O54991 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cntnap1O54991 AC155252.1-201ENSMUST00000226462 1208 ntBASIC19.79■□□□□ 0.76
Cntnap1O54991 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Cntnap1O54991 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Cntnap1O54991 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cntnap1O54991 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cntnap1O54991 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Cntnap1O54991 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cntnap1O54991 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cntnap1O54991 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cntnap1O54991 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC19.78■□□□□ 0.76
Cntnap1O54991 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cntnap1O54991 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cntnap1O54991 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC19.78■□□□□ 0.76
Cntnap1O54991 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Cntnap1O54991 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Cntnap1O54991 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cntnap1O54991 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cntnap1O54991 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cntnap1O54991 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Cntnap1O54991 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC19.78■□□□□ 0.76
Cntnap1O54991 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cntnap1O54991 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cntnap1O54991 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cntnap1O54991 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cntnap1O54991 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.77■□□□□ 0.76
Cntnap1O54991 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cntnap1O54991 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cntnap1O54991 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC19.77■□□□□ 0.76
Cntnap1O54991 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cntnap1O54991 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.77■□□□□ 0.76
Cntnap1O54991 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cntnap1O54991 Gm7067-201ENSMUST00000207698 1249 ntBASIC19.77■□□□□ 0.76
Cntnap1O54991 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC19.77■□□□□ 0.76
Cntnap1O54991 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cntnap1O54991 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC19.77■□□□□ 0.76
Cntnap1O54991 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Cntnap1O54991 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cntnap1O54991 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cntnap1O54991 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cntnap1O54991 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Cntnap1O54991 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Cntnap1O54991 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cntnap1O54991 Gm13337-201ENSMUST00000119183 1594 ntBASIC19.76■□□□□ 0.75
Cntnap1O54991 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cntnap1O54991 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Cntnap1O54991 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cntnap1O54991 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cntnap1O54991 Gm14660-201ENSMUST00000119809 575 ntBASIC19.76■□□□□ 0.75
Cntnap1O54991 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cntnap1O54991 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Cntnap1O54991 Rn7s1-201ENSMUST00000174924 300 ntBASIC19.76■□□□□ 0.75
Cntnap1O54991 Rn7s2-201ENSMUST00000175032 300 ntBASIC19.76■□□□□ 0.75
Cntnap1O54991 Gm26461-201ENSMUST00000175064 290 ntBASIC19.76■□□□□ 0.75
Cntnap1O54991 Gm9728-201ENSMUST00000200197 1055 ntBASIC19.76■□□□□ 0.75
Cntnap1O54991 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Cntnap1O54991 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cntnap1O54991 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cntnap1O54991 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cntnap1O54991 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Cntnap1O54991 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Cntnap1O54991 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cntnap1O54991 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cntnap1O54991 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cntnap1O54991 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cntnap1O54991 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cntnap1O54991 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cntnap1O54991 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC19.75■□□□□ 0.75
Cntnap1O54991 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cntnap1O54991 Gm3786-201ENSMUST00000202659 378 ntBASIC19.75■□□□□ 0.75
Cntnap1O54991 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cntnap1O54991 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cntnap1O54991 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Cntnap1O54991 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cntnap1O54991 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cntnap1O54991 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Cntnap1O54991 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cntnap1O54991 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC19.75■□□□□ 0.75
Cntnap1O54991 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC19.75■□□□□ 0.75
Cntnap1O54991 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cntnap1O54991 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cntnap1O54991 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cntnap1O54991 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cntnap1O54991 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cntnap1O54991 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms