Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Kcnu1O54982 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Kcnu1O54982 Gm14859-201ENSMUST00000117752 357 ntBASIC16.55■□□□□ 0.24
Kcnu1O54982 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Kcnu1O54982 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.55■□□□□ 0.24
Kcnu1O54982 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Kcnu1O54982 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Kcnu1O54982 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Kcnu1O54982 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Kcnu1O54982 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Kcnu1O54982 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Kcnu1O54982 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Kcnu1O54982 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Kcnu1O54982 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Kcnu1O54982 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Kcnu1O54982 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.54■□□□□ 0.24
Kcnu1O54982 Gm12497-201ENSMUST00000138778 237 ntBASIC16.54■□□□□ 0.24
Kcnu1O54982 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.54■□□□□ 0.24
Kcnu1O54982 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Kcnu1O54982 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Kcnu1O54982 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Kcnu1O54982 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Kcnu1O54982 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.54■□□□□ 0.24
Kcnu1O54982 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.54■□□□□ 0.24
Kcnu1O54982 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Kcnu1O54982 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Kcnu1O54982 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.54■□□□□ 0.24
Kcnu1O54982 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Kcnu1O54982 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Kcnu1O54982 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Kcnu1O54982 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Kcnu1O54982 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Kcnu1O54982 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Kcnu1O54982 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Kcnu1O54982 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Kcnu1O54982 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Kcnu1O54982 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Kcnu1O54982 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.53■□□□□ 0.24
Kcnu1O54982 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.53■□□□□ 0.24
Kcnu1O54982 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Kcnu1O54982 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Kcnu1O54982 Gm17807-201ENSMUST00000186869 298 ntBASIC16.53■□□□□ 0.24
Kcnu1O54982 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Kcnu1O54982 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.53■□□□□ 0.24
Kcnu1O54982 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Kcnu1O54982 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Kcnu1O54982 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.53■□□□□ 0.24
Kcnu1O54982 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Kcnu1O54982 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Kcnu1O54982 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Kcnu1O54982 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Kcnu1O54982 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Kcnu1O54982 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Kcnu1O54982 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Kcnu1O54982 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Kcnu1O54982 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Kcnu1O54982 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
Kcnu1O54982 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Kcnu1O54982 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Kcnu1O54982 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Kcnu1O54982 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Kcnu1O54982 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Kcnu1O54982 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Kcnu1O54982 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Kcnu1O54982 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Kcnu1O54982 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Kcnu1O54982 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Kcnu1O54982 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Kcnu1O54982 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Kcnu1O54982 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Kcnu1O54982 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Kcnu1O54982 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.52■□□□□ 0.24
Kcnu1O54982 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Kcnu1O54982 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.52■□□□□ 0.24
Kcnu1O54982 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Kcnu1O54982 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Kcnu1O54982 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.52■□□□□ 0.24
Kcnu1O54982 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.52■□□□□ 0.24
Kcnu1O54982 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Kcnu1O54982 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Kcnu1O54982 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.52■□□□□ 0.24
Kcnu1O54982 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Kcnu1O54982 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
Kcnu1O54982 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Kcnu1O54982 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Kcnu1O54982 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Kcnu1O54982 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Kcnu1O54982 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Kcnu1O54982 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Kcnu1O54982 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.52■□□□□ 0.23
Kcnu1O54982 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Kcnu1O54982 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.51■□□□□ 0.23
Kcnu1O54982 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Kcnu1O54982 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Kcnu1O54982 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Kcnu1O54982 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Kcnu1O54982 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Kcnu1O54982 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Kcnu1O54982 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Kcnu1O54982 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms