Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Per2O54943 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Per2O54943 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Per2O54943 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Per2O54943 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Per2O54943 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Per2O54943 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Per2O54943 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Per2O54943 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Per2O54943 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.2■□□□□ 0.18
Per2O54943 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Per2O54943 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Per2O54943 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Per2O54943 Gm12895-201ENSMUST00000122214 226 ntBASIC16.2■□□□□ 0.18
Per2O54943 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Per2O54943 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.2■□□□□ 0.18
Per2O54943 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Per2O54943 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Per2O54943 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.2■□□□□ 0.18
Per2O54943 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Per2O54943 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Per2O54943 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Per2O54943 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Per2O54943 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Per2O54943 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Per2O54943 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Per2O54943 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
Per2O54943 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Per2O54943 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Per2O54943 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Per2O54943 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Per2O54943 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Per2O54943 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Per2O54943 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Per2O54943 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Per2O54943 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Per2O54943 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Per2O54943 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Per2O54943 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Per2O54943 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Per2O54943 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Per2O54943 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Per2O54943 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Per2O54943 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Per2O54943 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Per2O54943 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Per2O54943 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Per2O54943 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Per2O54943 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Per2O54943 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Per2O54943 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Per2O54943 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Per2O54943 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Per2O54943 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Per2O54943 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.19■□□□□ 0.18
Per2O54943 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Per2O54943 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.19■□□□□ 0.18
Per2O54943 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.19■□□□□ 0.18
Per2O54943 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Per2O54943 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Per2O54943 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Per2O54943 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Per2O54943 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Per2O54943 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Per2O54943 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Per2O54943 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Per2O54943 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Per2O54943 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Per2O54943 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Per2O54943 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Per2O54943 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Per2O54943 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Per2O54943 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.18■□□□□ 0.18
Per2O54943 Gm4459-201ENSMUST00000118750 468 ntBASIC16.18■□□□□ 0.18
Per2O54943 Gm7506-201ENSMUST00000207758 815 ntBASIC16.18■□□□□ 0.18
Per2O54943 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Per2O54943 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Per2O54943 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Per2O54943 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Per2O54943 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Per2O54943 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Per2O54943 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Per2O54943 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Per2O54943 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Per2O54943 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Per2O54943 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Per2O54943 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Per2O54943 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Per2O54943 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Per2O54943 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Per2O54943 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Per2O54943 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Per2O54943 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Per2O54943 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Per2O54943 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Per2O54943 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Per2O54943 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.17■□□□□ 0.18
Per2O54943 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.17■□□□□ 0.18
Per2O54943 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.17■□□□□ 0.18
Per2O54943 Gm19164-201ENSMUST00000210667 640 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms