Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Per1O35973 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.79■□□□□ 0.28
Per1O35973 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.79■□□□□ 0.28
Per1O35973 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Per1O35973 Mir3113-201ENSMUST00000175478 76 ntBASIC16.79■□□□□ 0.28
Per1O35973 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.79■□□□□ 0.28
Per1O35973 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Per1O35973 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Per1O35973 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Per1O35973 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Per1O35973 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Per1O35973 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Per1O35973 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Per1O35973 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Per1O35973 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Per1O35973 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Per1O35973 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Per1O35973 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per1O35973 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per1O35973 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Per1O35973 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per1O35973 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per1O35973 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Per1O35973 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per1O35973 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per1O35973 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per1O35973 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Per1O35973 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per1O35973 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per1O35973 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Per1O35973 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
Per1O35973 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.78■□□□□ 0.28
Per1O35973 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.78■□□□□ 0.28
Per1O35973 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.78■□□□□ 0.28
Per1O35973 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per1O35973 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per1O35973 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Per1O35973 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per1O35973 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per1O35973 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.78■□□□□ 0.28
Per1O35973 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per1O35973 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per1O35973 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Per1O35973 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.77■□□□□ 0.28
Per1O35973 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.77■□□□□ 0.28
Per1O35973 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Per1O35973 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Per1O35973 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Per1O35973 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Per1O35973 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Per1O35973 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Per1O35973 Gm2272-201ENSMUST00000194903 582 ntBASIC16.77■□□□□ 0.28
Per1O35973 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Per1O35973 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Per1O35973 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Per1O35973 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Per1O35973 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Per1O35973 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Per1O35973 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Per1O35973 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Per1O35973 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Per1O35973 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Per1O35973 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Per1O35973 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Per1O35973 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Per1O35973 Gm5177-201ENSMUST00000183092 997 ntBASIC16.76■□□□□ 0.27
Per1O35973 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Per1O35973 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Per1O35973 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Per1O35973 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Per1O35973 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Per1O35973 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Per1O35973 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Per1O35973 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Per1O35973 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Per1O35973 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Per1O35973 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Per1O35973 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.76■□□□□ 0.27
Per1O35973 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Per1O35973 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Per1O35973 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
Per1O35973 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Per1O35973 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.75■□□□□ 0.27
Per1O35973 Gm12008-201ENSMUST00000117791 755 ntBASIC16.75■□□□□ 0.27
Per1O35973 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.75■□□□□ 0.27
Per1O35973 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Per1O35973 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Per1O35973 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Per1O35973 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Per1O35973 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Per1O35973 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.75■□□□□ 0.27
Per1O35973 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Per1O35973 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Per1O35973 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Per1O35973 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Per1O35973 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Per1O35973 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Per1O35973 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Per1O35973 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Per1O35973 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms