Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Npc1O35604 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Npc1O35604 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.16■□□□□ 0.02
Npc1O35604 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.16■□□□□ 0.02
Npc1O35604 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.16■□□□□ 0.02
Npc1O35604 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.16■□□□□ 0.02
Npc1O35604 Gm43514-201ENSMUST00000198852 424 ntBASIC15.16■□□□□ 0.02
Npc1O35604 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Npc1O35604 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
Npc1O35604 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.16■□□□□ 0.02
Npc1O35604 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Npc1O35604 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Npc1O35604 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Npc1O35604 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Npc1O35604 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Npc1O35604 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Npc1O35604 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Npc1O35604 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Npc1O35604 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Npc1O35604 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Npc1O35604 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.16■□□□□ 0.02
Npc1O35604 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Npc1O35604 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Npc1O35604 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Npc1O35604 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Npc1O35604 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Npc1O35604 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Npc1O35604 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Npc1O35604 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Npc1O35604 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Npc1O35604 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Npc1O35604 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Npc1O35604 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.15■□□□□ 0.02
Npc1O35604 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Npc1O35604 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Npc1O35604 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Npc1O35604 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Npc1O35604 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Npc1O35604 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Npc1O35604 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Npc1O35604 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Npc1O35604 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.15■□□□□ 0.02
Npc1O35604 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Npc1O35604 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.15■□□□□ 0.02
Npc1O35604 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Npc1O35604 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Npc1O35604 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Npc1O35604 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Npc1O35604 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.15■□□□□ 0.02
Npc1O35604 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Npc1O35604 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Npc1O35604 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Npc1O35604 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Npc1O35604 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.15■□□□□ 0.02
Npc1O35604 Asic1-205ENSMUST00000228185 1818 ntBASIC15.15■□□□□ 0.02
Npc1O35604 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Npc1O35604 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Npc1O35604 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Npc1O35604 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Npc1O35604 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Npc1O35604 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Npc1O35604 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Npc1O35604 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Npc1O35604 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Npc1O35604 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Npc1O35604 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Npc1O35604 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.14■□□□□ 0.01
Npc1O35604 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Npc1O35604 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Npc1O35604 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Npc1O35604 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Npc1O35604 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Npc1O35604 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Npc1O35604 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.14■□□□□ 0.01
Npc1O35604 Mir5131-201ENSMUST00000175426 93 ntBASIC15.14■□□□□ 0.01
Npc1O35604 Mir5126-201ENSMUST00000175513 77 ntBASIC15.14■□□□□ 0.01
Npc1O35604 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.14■□□□□ 0.01
Npc1O35604 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Npc1O35604 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.14■□□□□ 0.01
Npc1O35604 AV026068-213ENSMUST00000223675 1171 ntBASIC15.14■□□□□ 0.01
Npc1O35604 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Npc1O35604 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.14■□□□□ 0.01
Npc1O35604 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Npc1O35604 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Npc1O35604 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Npc1O35604 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Npc1O35604 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Npc1O35604 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Npc1O35604 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Npc1O35604 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Npc1O35604 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Npc1O35604 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Npc1O35604 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Npc1O35604 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Npc1O35604 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Npc1O35604 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Npc1O35604 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Npc1O35604 Gm6550-201ENSMUST00000187574 993 ntBASIC15.13■□□□□ 0.01
Npc1O35604 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Npc1O35604 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms