Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf2O35218 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf2O35218 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf2O35218 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf2O35218 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf2O35218 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf2O35218 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf2O35218 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf2O35218 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf2O35218 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cpsf2O35218 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf2O35218 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf2O35218 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf2O35218 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf2O35218 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.63■□□□□ 0.25
Cpsf2O35218 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf2O35218 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.63■□□□□ 0.25
Cpsf2O35218 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Cpsf2O35218 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.63■□□□□ 0.25
Cpsf2O35218 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf2O35218 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf2O35218 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Cpsf2O35218 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf2O35218 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf2O35218 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf2O35218 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Cpsf2O35218 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf2O35218 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.63■□□□□ 0.25
Cpsf2O35218 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf2O35218 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Cpsf2O35218 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf2O35218 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cpsf2O35218 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Cpsf2O35218 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.62■□□□□ 0.25
Cpsf2O35218 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf2O35218 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf2O35218 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf2O35218 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf2O35218 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf2O35218 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf2O35218 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf2O35218 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf2O35218 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf2O35218 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf2O35218 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf2O35218 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf2O35218 Gm15794-201ENSMUST00000120182 631 ntBASIC16.62■□□□□ 0.25
Cpsf2O35218 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.62■□□□□ 0.25
Cpsf2O35218 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf2O35218 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.62■□□□□ 0.25
Cpsf2O35218 Gm23634-201ENSMUST00000175071 91 ntBASIC16.62■□□□□ 0.25
Cpsf2O35218 Gm45328-201ENSMUST00000210942 917 ntBASIC16.62■□□□□ 0.25
Cpsf2O35218 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf2O35218 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf2O35218 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cpsf2O35218 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf2O35218 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf2O35218 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf2O35218 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf2O35218 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cpsf2O35218 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf2O35218 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf2O35218 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf2O35218 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf2O35218 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf2O35218 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf2O35218 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf2O35218 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.61■□□□□ 0.25
Cpsf2O35218 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf2O35218 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf2O35218 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf2O35218 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf2O35218 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cpsf2O35218 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf2O35218 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf2O35218 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf2O35218 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf2O35218 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf2O35218 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf2O35218 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf2O35218 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf2O35218 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Cpsf2O35218 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cpsf2O35218 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf2O35218 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.61■□□□□ 0.25
Cpsf2O35218 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf2O35218 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf2O35218 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpsf2O35218 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cpsf2O35218 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpsf2O35218 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cpsf2O35218 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cpsf2O35218 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cpsf2O35218 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cpsf2O35218 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpsf2O35218 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpsf2O35218 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpsf2O35218 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpsf2O35218 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.6■□□□□ 0.25
Cpsf2O35218 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms