Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hdac1O09106 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hdac1O09106 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hdac1O09106 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hdac1O09106 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hdac1O09106 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Hdac1O09106 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hdac1O09106 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hdac1O09106 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hdac1O09106 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hdac1O09106 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Hdac1O09106 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.48■□□□□ 0.55
Hdac1O09106 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.48■□□□□ 0.55
Hdac1O09106 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Hdac1O09106 Gm45328-201ENSMUST00000210942 917 ntBASIC18.48■□□□□ 0.55
Hdac1O09106 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hdac1O09106 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.48■□□□□ 0.55
Hdac1O09106 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.48■□□□□ 0.55
Hdac1O09106 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
Hdac1O09106 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hdac1O09106 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hdac1O09106 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Hdac1O09106 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hdac1O09106 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hdac1O09106 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hdac1O09106 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hdac1O09106 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hdac1O09106 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hdac1O09106 Gm45504-201ENSMUST00000211407 2107 ntBASIC18.47■□□□□ 0.55
Hdac1O09106 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Hdac1O09106 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hdac1O09106 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hdac1O09106 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hdac1O09106 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hdac1O09106 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Hdac1O09106 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Hdac1O09106 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.47■□□□□ 0.55
Hdac1O09106 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.47■□□□□ 0.55
Hdac1O09106 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hdac1O09106 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hdac1O09106 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hdac1O09106 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hdac1O09106 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hdac1O09106 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hdac1O09106 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hdac1O09106 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hdac1O09106 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hdac1O09106 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hdac1O09106 Gm45760-201ENSMUST00000212190 1782 ntBASIC18.47■□□□□ 0.55
Hdac1O09106 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hdac1O09106 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Hdac1O09106 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hdac1O09106 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac1O09106 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac1O09106 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
Hdac1O09106 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Hdac1O09106 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac1O09106 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac1O09106 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Hdac1O09106 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac1O09106 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.46■□□□□ 0.55
Hdac1O09106 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.46■□□□□ 0.55
Hdac1O09106 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac1O09106 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac1O09106 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac1O09106 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Hdac1O09106 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac1O09106 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.46■□□□□ 0.55
Hdac1O09106 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac1O09106 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac1O09106 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.46■□□□□ 0.55
Hdac1O09106 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac1O09106 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac1O09106 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac1O09106 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Hdac1O09106 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac1O09106 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac1O09106 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hdac1O09106 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac1O09106 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac1O09106 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac1O09106 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac1O09106 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.45■□□□□ 0.54
Hdac1O09106 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac1O09106 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac1O09106 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac1O09106 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac1O09106 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac1O09106 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac1O09106 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac1O09106 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Hdac1O09106 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Hdac1O09106 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac1O09106 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac1O09106 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac1O09106 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Hdac1O09106 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac1O09106 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac1O09106 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hdac1O09106 Gm14780-201ENSMUST00000118387 2737 ntBASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms