Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Hps1O08983 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Hps1O08983 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Hps1O08983 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Hps1O08983 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.44□□□□□ -0.1
Hps1O08983 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hps1O08983 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hps1O08983 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hps1O08983 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hps1O08983 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hps1O08983 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hps1O08983 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hps1O08983 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Hps1O08983 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hps1O08983 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hps1O08983 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hps1O08983 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hps1O08983 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hps1O08983 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hps1O08983 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hps1O08983 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hps1O08983 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.43□□□□□ -0.1
Hps1O08983 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Hps1O08983 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hps1O08983 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hps1O08983 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hps1O08983 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hps1O08983 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.43□□□□□ -0.1
Hps1O08983 Gm18115-201ENSMUST00000221209 621 ntBASIC14.43□□□□□ -0.1
Hps1O08983 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Hps1O08983 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hps1O08983 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hps1O08983 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hps1O08983 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hps1O08983 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hps1O08983 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hps1O08983 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hps1O08983 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Hps1O08983 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hps1O08983 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hps1O08983 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hps1O08983 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hps1O08983 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hps1O08983 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hps1O08983 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hps1O08983 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Hps1O08983 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Hps1O08983 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hps1O08983 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hps1O08983 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hps1O08983 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hps1O08983 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hps1O08983 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hps1O08983 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hps1O08983 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hps1O08983 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hps1O08983 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hps1O08983 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hps1O08983 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hps1O08983 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Hps1O08983 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hps1O08983 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hps1O08983 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hps1O08983 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hps1O08983 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hps1O08983 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hps1O08983 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hps1O08983 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hps1O08983 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hps1O08983 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hps1O08983 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hps1O08983 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hps1O08983 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hps1O08983 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hps1O08983 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.41□□□□□ -0.1
Hps1O08983 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hps1O08983 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hps1O08983 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hps1O08983 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hps1O08983 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.41□□□□□ -0.1
Hps1O08983 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.41□□□□□ -0.1
Hps1O08983 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hps1O08983 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hps1O08983 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Hps1O08983 Gm26039-201ENSMUST00000158152 144 ntBASIC14.41□□□□□ -0.1
Hps1O08983 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.41□□□□□ -0.1
Hps1O08983 Gm27742-201ENSMUST00000184667 60 ntBASIC14.41□□□□□ -0.1
Hps1O08983 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.41□□□□□ -0.1
Hps1O08983 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.41□□□□□ -0.1
Hps1O08983 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Hps1O08983 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hps1O08983 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.41□□□□□ -0.1
Hps1O08983 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Hps1O08983 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hps1O08983 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hps1O08983 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.41□□□□□ -0.1
Hps1O08983 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hps1O08983 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Hps1O08983 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.4□□□□□ -0.1
Hps1O08983 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms