Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ercc2O08811 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Ercc2O08811 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Ercc2O08811 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.89■□□□□ 0.13
Ercc2O08811 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ercc2O08811 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Ercc2O08811 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ercc2O08811 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ercc2O08811 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ercc2O08811 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ercc2O08811 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.89■□□□□ 0.13
Ercc2O08811 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ercc2O08811 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ercc2O08811 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ercc2O08811 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ercc2O08811 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.88■□□□□ 0.13
Ercc2O08811 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ercc2O08811 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Ercc2O08811 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ercc2O08811 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ercc2O08811 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ercc2O08811 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ercc2O08811 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ercc2O08811 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ercc2O08811 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Ercc2O08811 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.88■□□□□ 0.13
Ercc2O08811 Gm14722-201ENSMUST00000118943 689 ntBASIC15.88■□□□□ 0.13
Ercc2O08811 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ercc2O08811 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Ercc2O08811 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.88■□□□□ 0.13
Ercc2O08811 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.88■□□□□ 0.13
Ercc2O08811 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.88■□□□□ 0.13
Ercc2O08811 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.88■□□□□ 0.13
Ercc2O08811 Gm6089-201ENSMUST00000197666 938 ntBASIC15.88■□□□□ 0.13
Ercc2O08811 Gm5864-201ENSMUST00000202263 970 ntBASIC15.88■□□□□ 0.13
Ercc2O08811 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.88■□□□□ 0.13
Ercc2O08811 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.88■□□□□ 0.13
Ercc2O08811 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
Ercc2O08811 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ercc2O08811 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ercc2O08811 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ercc2O08811 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ercc2O08811 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ercc2O08811 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ercc2O08811 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ercc2O08811 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Ercc2O08811 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ercc2O08811 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Ercc2O08811 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Ercc2O08811 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ercc2O08811 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ercc2O08811 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ercc2O08811 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ercc2O08811 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ercc2O08811 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ercc2O08811 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ercc2O08811 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ercc2O08811 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ercc2O08811 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
Ercc2O08811 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Ercc2O08811 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.87■□□□□ 0.13
Ercc2O08811 Mir8098-201ENSMUST00000184011 137 ntBASIC15.87■□□□□ 0.13
Ercc2O08811 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.87■□□□□ 0.13
Ercc2O08811 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.87■□□□□ 0.13
Ercc2O08811 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.87■□□□□ 0.13
Ercc2O08811 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.87■□□□□ 0.13
Ercc2O08811 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ercc2O08811 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ercc2O08811 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ercc2O08811 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Ercc2O08811 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ercc2O08811 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Ercc2O08811 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ercc2O08811 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ercc2O08811 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ercc2O08811 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.86■□□□□ 0.13
Ercc2O08811 Gm7862-201ENSMUST00000121461 292 ntBASIC15.86■□□□□ 0.13
Ercc2O08811 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.86■□□□□ 0.13
Ercc2O08811 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Ercc2O08811 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ercc2O08811 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.86■□□□□ 0.13
Ercc2O08811 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.86■□□□□ 0.13
Ercc2O08811 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Ercc2O08811 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ercc2O08811 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ercc2O08811 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ercc2O08811 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ercc2O08811 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Ercc2O08811 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ercc2O08811 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ercc2O08811 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ercc2O08811 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ercc2O08811 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ercc2O08811 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ercc2O08811 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
Ercc2O08811 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ercc2O08811 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ercc2O08811 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ercc2O08811 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Ercc2O08811 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms