Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC18.93■□□□□ 0.62
Trim34bJ3QNR8 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.93■□□□□ 0.62
Trim34bJ3QNR8 Gm27494-201ENSMUST00000184735 189 ntBASIC18.93■□□□□ 0.62
Trim34bJ3QNR8 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18.93■□□□□ 0.62
Trim34bJ3QNR8 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim34bJ3QNR8 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim34bJ3QNR8 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim34bJ3QNR8 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim34bJ3QNR8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim34bJ3QNR8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim34bJ3QNR8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim34bJ3QNR8 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim34bJ3QNR8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Trim34bJ3QNR8 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 Gm12008-201ENSMUST00000117791 755 ntBASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 Mir1895-201ENSMUST00000122615 79 ntBASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 Gm11025-201ENSMUST00000140773 466 ntBASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 Gm10499-201ENSMUST00000174094 934 ntBASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Trim34bJ3QNR8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim34bJ3QNR8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18.91■□□□□ 0.62
Trim34bJ3QNR8 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Trim34bJ3QNR8 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim34bJ3QNR8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim34bJ3QNR8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim34bJ3QNR8 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim34bJ3QNR8 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim34bJ3QNR8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim34bJ3QNR8 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim34bJ3QNR8 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim34bJ3QNR8 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC18.91■□□□□ 0.62
Trim34bJ3QNR8 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim34bJ3QNR8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim34bJ3QNR8 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim34bJ3QNR8 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim34bJ3QNR8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.91■□□□□ 0.62
Trim34bJ3QNR8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim34bJ3QNR8 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Trim34bJ3QNR8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Trim34bJ3QNR8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim34bJ3QNR8 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim34bJ3QNR8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Trim34bJ3QNR8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim34bJ3QNR8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim34bJ3QNR8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim34bJ3QNR8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim34bJ3QNR8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim34bJ3QNR8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim34bJ3QNR8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Trim34bJ3QNR8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim34bJ3QNR8 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Trim34bJ3QNR8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim34bJ3QNR8 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Trim34bJ3QNR8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim34bJ3QNR8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim34bJ3QNR8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim34bJ3QNR8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim34bJ3QNR8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.9■□□□□ 0.62
Trim34bJ3QNR8 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim34bJ3QNR8 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.9■□□□□ 0.62
Trim34bJ3QNR8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
Trim34bJ3QNR8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim34bJ3QNR8 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.9■□□□□ 0.62
Trim34bJ3QNR8 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC18.9■□□□□ 0.62
Trim34bJ3QNR8 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Trim34bJ3QNR8 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC18.9■□□□□ 0.62
Trim34bJ3QNR8 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC18.9■□□□□ 0.62
Trim34bJ3QNR8 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim34bJ3QNR8 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.9■□□□□ 0.62
Trim34bJ3QNR8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Trim34bJ3QNR8 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim34bJ3QNR8 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Trim34bJ3QNR8 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim34bJ3QNR8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim34bJ3QNR8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim34bJ3QNR8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms