Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm3727J3QM54 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm3727J3QM54 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Gm3727J3QM54 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Gm3727J3QM54 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Gm3727J3QM54 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Gm3727J3QM54 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm3727J3QM54 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm3727J3QM54 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm3727J3QM54 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gm3727J3QM54 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.23□□□□□ -0.29
Gm3727J3QM54 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm3727J3QM54 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.23□□□□□ -0.29
Gm3727J3QM54 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.23□□□□□ -0.29
Gm3727J3QM54 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm3727J3QM54 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gm3727J3QM54 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Gm3727J3QM54 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm3727J3QM54 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm3727J3QM54 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Gm3727J3QM54 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Gm3727J3QM54 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.23□□□□□ -0.29
Gm3727J3QM54 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.23□□□□□ -0.29
Gm3727J3QM54 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gm3727J3QM54 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm3727J3QM54 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Gm3727J3QM54 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Gm3727J3QM54 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm3727J3QM54 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm3727J3QM54 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm3727J3QM54 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gm3727J3QM54 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Gm3727J3QM54 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gm3727J3QM54 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm3727J3QM54 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gm3727J3QM54 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gm3727J3QM54 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm3727J3QM54 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm3727J3QM54 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gm3727J3QM54 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Gm3727J3QM54 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm3727J3QM54 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm3727J3QM54 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.22□□□□□ -0.29
Gm3727J3QM54 Gm27275-201ENSMUST00000184318 272 ntBASIC13.22□□□□□ -0.29
Gm3727J3QM54 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Gm3727J3QM54 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm3727J3QM54 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm3727J3QM54 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.22□□□□□ -0.29
Gm3727J3QM54 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm3727J3QM54 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm3727J3QM54 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Gm3727J3QM54 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gm3727J3QM54 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm3727J3QM54 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gm3727J3QM54 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gm3727J3QM54 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gm3727J3QM54 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm3727J3QM54 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm3727J3QM54 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm3727J3QM54 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Gm3727J3QM54 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm3727J3QM54 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Gm3727J3QM54 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm3727J3QM54 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Gm3727J3QM54 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Gm3727J3QM54 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm3727J3QM54 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm3727J3QM54 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Gm3727J3QM54 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Gm3727J3QM54 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm3727J3QM54 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Gm3727J3QM54 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Gm3727J3QM54 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Gm3727J3QM54 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm3727J3QM54 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm3727J3QM54 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm3727J3QM54 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.21□□□□□ -0.29
Gm3727J3QM54 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Gm3727J3QM54 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm3727J3QM54 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Gm3727J3QM54 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.21□□□□□ -0.29
Gm3727J3QM54 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Gm3727J3QM54 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm3727J3QM54 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.21□□□□□ -0.29
Gm3727J3QM54 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm3727J3QM54 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Gm3727J3QM54 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gm3727J3QM54 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
Gm3727J3QM54 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.21□□□□□ -0.3
Gm3727J3QM54 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.21□□□□□ -0.3
Gm3727J3QM54 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gm3727J3QM54 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gm3727J3QM54 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gm3727J3QM54 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gm3727J3QM54 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.21□□□□□ -0.3
Gm3727J3QM54 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gm3727J3QM54 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms