Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NpcdF8VQB8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NpcdF8VQB8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NpcdF8VQB8 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NpcdF8VQB8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NpcdF8VQB8 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NpcdF8VQB8 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
NpcdF8VQB8 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NpcdF8VQB8 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC18.62■□□□□ 0.57
NpcdF8VQB8 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC18.62■□□□□ 0.57
NpcdF8VQB8 Gm5779-201ENSMUST00000218467 910 ntBASIC18.62■□□□□ 0.57
NpcdF8VQB8 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC18.62■□□□□ 0.57
NpcdF8VQB8 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NpcdF8VQB8 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NpcdF8VQB8 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NpcdF8VQB8 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NpcdF8VQB8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NpcdF8VQB8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NpcdF8VQB8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NpcdF8VQB8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NpcdF8VQB8 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NpcdF8VQB8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NpcdF8VQB8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NpcdF8VQB8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NpcdF8VQB8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NpcdF8VQB8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NpcdF8VQB8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
NpcdF8VQB8 Gm12017-201ENSMUST00000122453 1003 ntBASIC18.61■□□□□ 0.57
NpcdF8VQB8 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC18.61■□□□□ 0.57
NpcdF8VQB8 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.61■□□□□ 0.57
NpcdF8VQB8 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NpcdF8VQB8 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC18.61■□□□□ 0.57
NpcdF8VQB8 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NpcdF8VQB8 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NpcdF8VQB8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NpcdF8VQB8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NpcdF8VQB8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NpcdF8VQB8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NpcdF8VQB8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NpcdF8VQB8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.61■□□□□ 0.57
NpcdF8VQB8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NpcdF8VQB8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NpcdF8VQB8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NpcdF8VQB8 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
NpcdF8VQB8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
NpcdF8VQB8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NpcdF8VQB8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NpcdF8VQB8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NpcdF8VQB8 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
NpcdF8VQB8 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
NpcdF8VQB8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NpcdF8VQB8 Gm27989-201ENSMUST00000184721 107 ntBASIC18.6■□□□□ 0.57
NpcdF8VQB8 Gm18187-201ENSMUST00000196476 984 ntBASIC18.6■□□□□ 0.57
NpcdF8VQB8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NpcdF8VQB8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NpcdF8VQB8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NpcdF8VQB8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.6■□□□□ 0.57
NpcdF8VQB8 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
NpcdF8VQB8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NpcdF8VQB8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NpcdF8VQB8 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NpcdF8VQB8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NpcdF8VQB8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NpcdF8VQB8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
NpcdF8VQB8 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.6■□□□□ 0.57
NpcdF8VQB8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NpcdF8VQB8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NpcdF8VQB8 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NpcdF8VQB8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NpcdF8VQB8 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC18.59■□□□□ 0.57
NpcdF8VQB8 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NpcdF8VQB8 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NpcdF8VQB8 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC18.59■□□□□ 0.57
NpcdF8VQB8 Gm18246-201ENSMUST00000221023 728 ntBASIC18.59■□□□□ 0.57
NpcdF8VQB8 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NpcdF8VQB8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NpcdF8VQB8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NpcdF8VQB8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NpcdF8VQB8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
NpcdF8VQB8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NpcdF8VQB8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
NpcdF8VQB8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
NpcdF8VQB8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
NpcdF8VQB8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NpcdF8VQB8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NpcdF8VQB8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NpcdF8VQB8 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.58■□□□□ 0.56
NpcdF8VQB8 Gm12008-201ENSMUST00000117791 755 ntBASIC18.58■□□□□ 0.56
NpcdF8VQB8 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18.58■□□□□ 0.56
NpcdF8VQB8 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC18.58■□□□□ 0.56
NpcdF8VQB8 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NpcdF8VQB8 Gm27618-201ENSMUST00000183671 60 ntBASIC18.58■□□□□ 0.56
NpcdF8VQB8 Gm43433-201ENSMUST00000196573 481 ntBASIC18.58■□□□□ 0.56
NpcdF8VQB8 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NpcdF8VQB8 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NpcdF8VQB8 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NpcdF8VQB8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NpcdF8VQB8 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.58■□□□□ 0.56
NpcdF8VQB8 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NpcdF8VQB8 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms