Protein–RNA interactions for Protein: E9Q8I6

Vmn1r55, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r55E9Q8I6 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r55E9Q8I6 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.54■□□□□ 0.08
Vmn1r55E9Q8I6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r55E9Q8I6 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Vmn1r55E9Q8I6 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r55E9Q8I6 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 Gm14701-201ENSMUST00000117156 348 ntBASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Vmn1r55E9Q8I6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r55E9Q8I6 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r55E9Q8I6 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r55E9Q8I6 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Vmn1r55E9Q8I6 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r55E9Q8I6 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r55E9Q8I6 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.52■□□□□ 0.08
Vmn1r55E9Q8I6 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r55E9Q8I6 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Vmn1r55E9Q8I6 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Vmn1r55E9Q8I6 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r55E9Q8I6 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.52■□□□□ 0.08
Vmn1r55E9Q8I6 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.52■□□□□ 0.08
Vmn1r55E9Q8I6 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Vmn1r55E9Q8I6 Gm8396-201ENSMUST00000057361 823 ntBASIC15.52■□□□□ 0.08
Vmn1r55E9Q8I6 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.52■□□□□ 0.08
Vmn1r55E9Q8I6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.52■□□□□ 0.08
Vmn1r55E9Q8I6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vmn1r55E9Q8I6 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vmn1r55E9Q8I6 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vmn1r55E9Q8I6 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
Vmn1r55E9Q8I6 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vmn1r55E9Q8I6 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vmn1r55E9Q8I6 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vmn1r55E9Q8I6 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.52■□□□□ 0.07
Vmn1r55E9Q8I6 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vmn1r55E9Q8I6 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
Vmn1r55E9Q8I6 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vmn1r55E9Q8I6 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vmn1r55E9Q8I6 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vmn1r55E9Q8I6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Vmn1r55E9Q8I6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vmn1r55E9Q8I6 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vmn1r55E9Q8I6 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vmn1r55E9Q8I6 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vmn1r55E9Q8I6 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vmn1r55E9Q8I6 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.51■□□□□ 0.07
Vmn1r55E9Q8I6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vmn1r55E9Q8I6 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.51■□□□□ 0.07
Vmn1r55E9Q8I6 Gm15920-201ENSMUST00000118998 402 ntBASIC15.51■□□□□ 0.07
Vmn1r55E9Q8I6 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.51■□□□□ 0.07
Vmn1r55E9Q8I6 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vmn1r55E9Q8I6 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.51■□□□□ 0.07
Vmn1r55E9Q8I6 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vmn1r55E9Q8I6 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Vmn1r55E9Q8I6 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vmn1r55E9Q8I6 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vmn1r55E9Q8I6 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vmn1r55E9Q8I6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vmn1r55E9Q8I6 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.51■□□□□ 0.07
Vmn1r55E9Q8I6 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vmn1r55E9Q8I6 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Vmn1r55E9Q8I6 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vmn1r55E9Q8I6 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vmn1r55E9Q8I6 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Vmn1r55E9Q8I6 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Vmn1r55E9Q8I6 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vmn1r55E9Q8I6 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.5■□□□□ 0.07
Vmn1r55E9Q8I6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vmn1r55E9Q8I6 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Vmn1r55E9Q8I6 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vmn1r55E9Q8I6 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vmn1r55E9Q8I6 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Vmn1r55E9Q8I6 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms