Protein–RNA interactions for Protein: E9PZM4

Chd2, Chromodomain-helicase-DNA-binding protein 2, mousemouse

Known RBP Predictions only

Length 1,827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd2E9PZM4 Gm20445-201ENSMUST00000061905 565 ntBASIC21.09■□□□□ 0.97
Chd2E9PZM4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd2E9PZM4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd2E9PZM4 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd2E9PZM4 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd2E9PZM4 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd2E9PZM4 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Chd2E9PZM4 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC21.09■□□□□ 0.97
Chd2E9PZM4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Chd2E9PZM4 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Chd2E9PZM4 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC21.08■□□□□ 0.97
Chd2E9PZM4 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC21.08■□□□□ 0.97
Chd2E9PZM4 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC21.08■□□□□ 0.97
Chd2E9PZM4 Cd63-ps-201ENSMUST00000145417 875 ntBASIC21.08■□□□□ 0.97
Chd2E9PZM4 Gm9522-201ENSMUST00000182394 926 ntBASIC21.08■□□□□ 0.97
Chd2E9PZM4 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd2E9PZM4 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Chd2E9PZM4 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Chd2E9PZM4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd2E9PZM4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd2E9PZM4 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Chd2E9PZM4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd2E9PZM4 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Chd2E9PZM4 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd2E9PZM4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Chd2E9PZM4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd2E9PZM4 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chd2E9PZM4 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chd2E9PZM4 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chd2E9PZM4 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Chd2E9PZM4 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chd2E9PZM4 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chd2E9PZM4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Chd2E9PZM4 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chd2E9PZM4 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chd2E9PZM4 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chd2E9PZM4 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd2E9PZM4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd2E9PZM4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd2E9PZM4 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Chd2E9PZM4 AY702102-202ENSMUST00000194651 1173 ntBASIC21.07■□□□□ 0.96
Chd2E9PZM4 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd2E9PZM4 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC21.07■□□□□ 0.96
Chd2E9PZM4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd2E9PZM4 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd2E9PZM4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Chd2E9PZM4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd2E9PZM4 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd2E9PZM4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd2E9PZM4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd2E9PZM4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd2E9PZM4 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC21.06■□□□□ 0.96
Chd2E9PZM4 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Chd2E9PZM4 Gm6266-201ENSMUST00000203844 806 ntBASIC21.06■□□□□ 0.96
Chd2E9PZM4 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC21.06■□□□□ 0.96
Chd2E9PZM4 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd2E9PZM4 Gm15823-201ENSMUST00000064305 670 ntBASIC21.06■□□□□ 0.96
Chd2E9PZM4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd2E9PZM4 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd2E9PZM4 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd2E9PZM4 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd2E9PZM4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd2E9PZM4 Gm6756-201ENSMUST00000180647 1620 ntBASIC21.06■□□□□ 0.96
Chd2E9PZM4 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Chd2E9PZM4 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Chd2E9PZM4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd2E9PZM4 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd2E9PZM4 Mir1897-201ENSMUST00000122581 272 ntBASIC21.06■□□□□ 0.96
Chd2E9PZM4 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC21.06■□□□□ 0.96
Chd2E9PZM4 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC21.06■□□□□ 0.96
Chd2E9PZM4 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC21.06■□□□□ 0.96
Chd2E9PZM4 AC149588.3-201ENSMUST00000227515 150 ntBASIC21.06■□□□□ 0.96
Chd2E9PZM4 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Chd2E9PZM4 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd2E9PZM4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC21.05■□□□□ 0.96
Chd2E9PZM4 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd2E9PZM4 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC21.05■□□□□ 0.96
Chd2E9PZM4 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd2E9PZM4 Gm45606-201ENSMUST00000209836 2795 ntBASIC21.05■□□□□ 0.96
Chd2E9PZM4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd2E9PZM4 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd2E9PZM4 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC21.05■□□□□ 0.96
Chd2E9PZM4 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd2E9PZM4 Gm43630-201ENSMUST00000201550 776 ntBASIC21.05■□□□□ 0.96
Chd2E9PZM4 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC21.05■□□□□ 0.96
Chd2E9PZM4 AC153962.4-201ENSMUST00000217878 242 ntBASIC21.05■□□□□ 0.96
Chd2E9PZM4 AC156016.3-201ENSMUST00000228623 344 ntBASIC21.05■□□□□ 0.96
Chd2E9PZM4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Chd2E9PZM4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd2E9PZM4 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd2E9PZM4 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd2E9PZM4 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Chd2E9PZM4 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd2E9PZM4 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC21.04■□□□□ 0.96
Chd2E9PZM4 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd2E9PZM4 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd2E9PZM4 AC149294.4-201ENSMUST00000227870 882 ntBASIC21.04■□□□□ 0.96
Chd2E9PZM4 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd2E9PZM4 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd2E9PZM4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms