Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.34■□□□□ 0.05
Col6a3E9PWQ3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a3E9PWQ3 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a3E9PWQ3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a3E9PWQ3 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC15.34■□□□□ 0.05
Col6a3E9PWQ3 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.34■□□□□ 0.05
Col6a3E9PWQ3 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a3E9PWQ3 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Col6a3E9PWQ3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a3E9PWQ3 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a3E9PWQ3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a3E9PWQ3 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a3E9PWQ3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a3E9PWQ3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Col6a3E9PWQ3 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.34■□□□□ 0.05
Col6a3E9PWQ3 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC15.34■□□□□ 0.05
Col6a3E9PWQ3 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Col6a3E9PWQ3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.34■□□□□ 0.05
Col6a3E9PWQ3 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Col6a3E9PWQ3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a3E9PWQ3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.33■□□□□ 0.05
Col6a3E9PWQ3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Col6a3E9PWQ3 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Col6a3E9PWQ3 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Col6a3E9PWQ3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Col6a3E9PWQ3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a3E9PWQ3 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a3E9PWQ3 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Col6a3E9PWQ3 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a3E9PWQ3 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Col6a3E9PWQ3 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a3E9PWQ3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.33■□□□□ 0.04
Col6a3E9PWQ3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a3E9PWQ3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a3E9PWQ3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a3E9PWQ3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a3E9PWQ3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a3E9PWQ3 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Col6a3E9PWQ3 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a3E9PWQ3 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a3E9PWQ3 Gm14263-201ENSMUST00000117955 746 ntBASIC15.33■□□□□ 0.04
Col6a3E9PWQ3 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a3E9PWQ3 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a3E9PWQ3 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Col6a3E9PWQ3 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.33■□□□□ 0.04
Col6a3E9PWQ3 Gm18054-201ENSMUST00000207539 555 ntBASIC15.33■□□□□ 0.04
Col6a3E9PWQ3 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Col6a3E9PWQ3 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a3E9PWQ3 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Col6a3E9PWQ3 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a3E9PWQ3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Gm7993-201ENSMUST00000200970 1384 ntBASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Dupd1-202ENSMUST00000224735 548 ntBASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Gm5356-201ENSMUST00000093326 615 ntBASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Col6a3E9PWQ3 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a3E9PWQ3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a3E9PWQ3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a3E9PWQ3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Col6a3E9PWQ3 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a3E9PWQ3 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a3E9PWQ3 Gm9176-201ENSMUST00000219955 1120 ntBASIC15.31■□□□□ 0.04
Col6a3E9PWQ3 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.31■□□□□ 0.04
Col6a3E9PWQ3 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a3E9PWQ3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a3E9PWQ3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Col6a3E9PWQ3 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a3E9PWQ3 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.31■□□□□ 0.04
Col6a3E9PWQ3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a3E9PWQ3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a3E9PWQ3 Gm27341-201ENSMUST00000183570 106 ntBASIC15.31■□□□□ 0.04
Col6a3E9PWQ3 Gm27501-201ENSMUST00000183599 107 ntBASIC15.31■□□□□ 0.04
Col6a3E9PWQ3 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms