Protein–RNA interactions for Protein: E9PVL6

Trim30b, Tripartite motif-containing 30B, mousemouse

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30bE9PVL6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim30bE9PVL6 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim30bE9PVL6 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim30bE9PVL6 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim30bE9PVL6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trim30bE9PVL6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
Trim30bE9PVL6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.48■□□□□ 0.23
Trim30bE9PVL6 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim30bE9PVL6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim30bE9PVL6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.48■□□□□ 0.23
Trim30bE9PVL6 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim30bE9PVL6 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.48■□□□□ 0.23
Trim30bE9PVL6 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim30bE9PVL6 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trim30bE9PVL6 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim30bE9PVL6 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim30bE9PVL6 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.47■□□□□ 0.23
Trim30bE9PVL6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim30bE9PVL6 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim30bE9PVL6 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trim30bE9PVL6 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim30bE9PVL6 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.47■□□□□ 0.23
Trim30bE9PVL6 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim30bE9PVL6 Gm9385-201ENSMUST00000117563 472 ntBASIC16.47■□□□□ 0.23
Trim30bE9PVL6 Gm16198-201ENSMUST00000118766 670 ntBASIC16.47■□□□□ 0.23
Trim30bE9PVL6 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim30bE9PVL6 Rpph1-201ENSMUST00000175096 319 ntBASIC16.47■□□□□ 0.23
Trim30bE9PVL6 Mir6956-201ENSMUST00000183598 62 ntBASIC16.47■□□□□ 0.23
Trim30bE9PVL6 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim30bE9PVL6 Gm44872-201ENSMUST00000207864 420 ntBASIC16.47■□□□□ 0.23
Trim30bE9PVL6 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.47■□□□□ 0.23
Trim30bE9PVL6 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.47■□□□□ 0.23
Trim30bE9PVL6 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.47■□□□□ 0.23
Trim30bE9PVL6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim30bE9PVL6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim30bE9PVL6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim30bE9PVL6 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.47■□□□□ 0.23
Trim30bE9PVL6 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim30bE9PVL6 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim30bE9PVL6 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim30bE9PVL6 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Trim30bE9PVL6 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim30bE9PVL6 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim30bE9PVL6 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim30bE9PVL6 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trim30bE9PVL6 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim30bE9PVL6 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim30bE9PVL6 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim30bE9PVL6 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim30bE9PVL6 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim30bE9PVL6 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim30bE9PVL6 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim30bE9PVL6 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.46■□□□□ 0.23
Trim30bE9PVL6 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
Trim30bE9PVL6 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.46■□□□□ 0.23
Trim30bE9PVL6 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.46■□□□□ 0.23
Trim30bE9PVL6 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim30bE9PVL6 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trim30bE9PVL6 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim30bE9PVL6 Gm5312-201ENSMUST00000203728 547 ntBASIC16.46■□□□□ 0.23
Trim30bE9PVL6 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim30bE9PVL6 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim30bE9PVL6 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trim30bE9PVL6 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim30bE9PVL6 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.46■□□□□ 0.23
Trim30bE9PVL6 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim30bE9PVL6 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim30bE9PVL6 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Trim30bE9PVL6 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim30bE9PVL6 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trim30bE9PVL6 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim30bE9PVL6 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim30bE9PVL6 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trim30bE9PVL6 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim30bE9PVL6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim30bE9PVL6 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim30bE9PVL6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim30bE9PVL6 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim30bE9PVL6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trim30bE9PVL6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim30bE9PVL6 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trim30bE9PVL6 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.45■□□□□ 0.22
Trim30bE9PVL6 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.45■□□□□ 0.22
Trim30bE9PVL6 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.45■□□□□ 0.22
Trim30bE9PVL6 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.45■□□□□ 0.22
Trim30bE9PVL6 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.45■□□□□ 0.22
Trim30bE9PVL6 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.45■□□□□ 0.22
Trim30bE9PVL6 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.45■□□□□ 0.22
Trim30bE9PVL6 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.45■□□□□ 0.22
Trim30bE9PVL6 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim30bE9PVL6 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim30bE9PVL6 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim30bE9PVL6 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim30bE9PVL6 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim30bE9PVL6 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim30bE9PVL6 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.45■□□□□ 0.22
Trim30bE9PVL6 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.45■□□□□ 0.22
Trim30bE9PVL6 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim30bE9PVL6 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
Trim30bE9PVL6 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms