Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28043E0CXC2 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28043E0CXC2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28043E0CXC2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28043E0CXC2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.62■□□□□ 0.09
Gm28043E0CXC2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28043E0CXC2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28043E0CXC2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.61■□□□□ 0.09
Gm28043E0CXC2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Gm28043E0CXC2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28043E0CXC2 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28043E0CXC2 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28043E0CXC2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28043E0CXC2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28043E0CXC2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Gm28043E0CXC2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28043E0CXC2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28043E0CXC2 Gm10052-201ENSMUST00000168019 960 ntBASIC15.61■□□□□ 0.09
Gm28043E0CXC2 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.61■□□□□ 0.09
Gm28043E0CXC2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28043E0CXC2 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.61■□□□□ 0.09
Gm28043E0CXC2 Gm7729-201ENSMUST00000050143 801 ntBASIC15.61■□□□□ 0.09
Gm28043E0CXC2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Gm28043E0CXC2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.61■□□□□ 0.09
Gm28043E0CXC2 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28043E0CXC2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.61■□□□□ 0.09
Gm28043E0CXC2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28043E0CXC2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28043E0CXC2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28043E0CXC2 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Gm28043E0CXC2 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Gm28043E0CXC2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm28043E0CXC2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Gm28043E0CXC2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Gm44430-201ENSMUST00000203376 995 ntBASIC15.6■□□□□ 0.09
Gm28043E0CXC2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm28043E0CXC2 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Gm28043E0CXC2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Gm28043E0CXC2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Gm28043E0CXC2 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Gm28043E0CXC2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28043E0CXC2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28043E0CXC2 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.59■□□□□ 0.09
Gm28043E0CXC2 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Gm28043E0CXC2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28043E0CXC2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Gm28043E0CXC2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28043E0CXC2 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Gm28043E0CXC2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28043E0CXC2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.59■□□□□ 0.09
Gm28043E0CXC2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28043E0CXC2 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28043E0CXC2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28043E0CXC2 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28043E0CXC2 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28043E0CXC2 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28043E0CXC2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Gm28043E0CXC2 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28043E0CXC2 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28043E0CXC2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28043E0CXC2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Gm28043E0CXC2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm28043E0CXC2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Gm28043E0CXC2 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Gm28043E0CXC2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.09
Gm28043E0CXC2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.09
Gm28043E0CXC2 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Gm28043E0CXC2 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.58■□□□□ 0.09
Gm28043E0CXC2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms