Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccnb1ip1D3Z3K2 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccnb1ip1D3Z3K2 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.09□□□□□ -0.15
Ccnb1ip1D3Z3K2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccnb1ip1D3Z3K2 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccnb1ip1D3Z3K2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccnb1ip1D3Z3K2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccnb1ip1D3Z3K2 Gm13186-201ENSMUST00000118031 316 ntBASIC14.09□□□□□ -0.15
Ccnb1ip1D3Z3K2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccnb1ip1D3Z3K2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.09□□□□□ -0.15
Ccnb1ip1D3Z3K2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccnb1ip1D3Z3K2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccnb1ip1D3Z3K2 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccnb1ip1D3Z3K2 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccnb1ip1D3Z3K2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ccnb1ip1D3Z3K2 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccnb1ip1D3Z3K2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccnb1ip1D3Z3K2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccnb1ip1D3Z3K2 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.09□□□□□ -0.15
Ccnb1ip1D3Z3K2 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Ccnb1ip1D3Z3K2 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
Ccnb1ip1D3Z3K2 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccnb1ip1D3Z3K2 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccnb1ip1D3Z3K2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccnb1ip1D3Z3K2 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
Ccnb1ip1D3Z3K2 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccnb1ip1D3Z3K2 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Ccnb1ip1D3Z3K2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccnb1ip1D3Z3K2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccnb1ip1D3Z3K2 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccnb1ip1D3Z3K2 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccnb1ip1D3Z3K2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Ccnb1ip1D3Z3K2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccnb1ip1D3Z3K2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccnb1ip1D3Z3K2 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccnb1ip1D3Z3K2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccnb1ip1D3Z3K2 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccnb1ip1D3Z3K2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccnb1ip1D3Z3K2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccnb1ip1D3Z3K2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccnb1ip1D3Z3K2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccnb1ip1D3Z3K2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccnb1ip1D3Z3K2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.08□□□□□ -0.16
Ccnb1ip1D3Z3K2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccnb1ip1D3Z3K2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccnb1ip1D3Z3K2 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccnb1ip1D3Z3K2 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccnb1ip1D3Z3K2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccnb1ip1D3Z3K2 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccnb1ip1D3Z3K2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccnb1ip1D3Z3K2 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ccnb1ip1D3Z3K2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccnb1ip1D3Z3K2 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccnb1ip1D3Z3K2 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ccnb1ip1D3Z3K2 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccnb1ip1D3Z3K2 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Dio3-201ENSMUST00000097228 1449 ntBASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Gm13158-201ENSMUST00000122007 736 ntBASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Gm18115-201ENSMUST00000221209 621 ntBASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ccnb1ip1D3Z3K2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccnb1ip1D3Z3K2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccnb1ip1D3Z3K2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccnb1ip1D3Z3K2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccnb1ip1D3Z3K2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccnb1ip1D3Z3K2 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccnb1ip1D3Z3K2 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccnb1ip1D3Z3K2 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ccnb1ip1D3Z3K2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ccnb1ip1D3Z3K2 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccnb1ip1D3Z3K2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccnb1ip1D3Z3K2 Gm7638-201ENSMUST00000121348 967 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms