Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Shank1D3YZU1 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shank1D3YZU1 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Gm12008-201ENSMUST00000117791 755 ntBASIC13.89□□□□□ -0.19
Shank1D3YZU1 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.89□□□□□ -0.19
Shank1D3YZU1 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.89□□□□□ -0.19
Shank1D3YZU1 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Shank1D3YZU1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.89□□□□□ -0.19
Shank1D3YZU1 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shank1D3YZU1 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.89□□□□□ -0.19
Shank1D3YZU1 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shank1D3YZU1 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shank1D3YZU1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shank1D3YZU1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shank1D3YZU1 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.88□□□□□ -0.19
Shank1D3YZU1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shank1D3YZU1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shank1D3YZU1 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shank1D3YZU1 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm22065-201ENSMUST00000103753 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm22066-201ENSMUST00000103761 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm24932-201ENSMUST00000103763 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm24115-201ENSMUST00000103799 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm22190-201ENSMUST00000103827 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm22191-201ENSMUST00000103831 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm24721-201ENSMUST00000103849 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm28018-201ENSMUST00000103869 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm26399-201ENSMUST00000103937 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm6257-201ENSMUST00000163864 910 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.88□□□□□ -0.19
Shank1D3YZU1 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.88□□□□□ -0.19
Shank1D3YZU1 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm25349-201ENSMUST00000177728 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm23616-201ENSMUST00000177797 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm25871-201ENSMUST00000177816 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm24752-201ENSMUST00000178240 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm24496-201ENSMUST00000178287 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm25649-201ENSMUST00000178476 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm25548-201ENSMUST00000178681 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm23147-201ENSMUST00000178841 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm26095-201ENSMUST00000179270 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm22171-201ENSMUST00000179283 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm23936-201ENSMUST00000179354 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm22619-201ENSMUST00000179516 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm25255-201ENSMUST00000179579 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm24755-201ENSMUST00000179691 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm26506-201ENSMUST00000179692 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm25086-201ENSMUST00000179931 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm23243-201ENSMUST00000180047 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm24659-201ENSMUST00000180212 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm24169-201ENSMUST00000180244 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm23689-201ENSMUST00000180354 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm27359-201ENSMUST00000184153 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm27785-201ENSMUST00000184268 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm27466-201ENSMUST00000184396 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm27703-201ENSMUST00000184836 110 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shank1D3YZU1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Shank1D3YZU1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shank1D3YZU1 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shank1D3YZU1 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shank1D3YZU1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shank1D3YZU1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Shank1D3YZU1 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shank1D3YZU1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shank1D3YZU1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shank1D3YZU1 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shank1D3YZU1 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm38294-201ENSMUST00000192831 381 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shank1D3YZU1 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.88□□□□□ -0.19
Shank1D3YZU1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shank1D3YZU1 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shank1D3YZU1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shank1D3YZU1 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shank1D3YZU1 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shank1D3YZU1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms