Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.62□□□□□ -0.55
Col6a5A6H584 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.62□□□□□ -0.55
Col6a5A6H584 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.62□□□□□ -0.55
Col6a5A6H584 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.62□□□□□ -0.55
Col6a5A6H584 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.62□□□□□ -0.55
Col6a5A6H584 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a5A6H584 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a5A6H584 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a5A6H584 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a5A6H584 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a5A6H584 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a5A6H584 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a5A6H584 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a5A6H584 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a5A6H584 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a5A6H584 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a5A6H584 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Col6a5A6H584 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC11.62□□□□□ -0.55
Col6a5A6H584 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.62□□□□□ -0.55
Col6a5A6H584 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a5A6H584 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a5A6H584 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.62□□□□□ -0.55
Col6a5A6H584 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a5A6H584 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Col6a5A6H584 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a5A6H584 Olfr582-201ENSMUST00000098212 960 ntBASIC11.62□□□□□ -0.55
Col6a5A6H584 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.62□□□□□ -0.55
Col6a5A6H584 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a5A6H584 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a5A6H584 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a5A6H584 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a5A6H584 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a5A6H584 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a5A6H584 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a5A6H584 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a5A6H584 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a5A6H584 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a5A6H584 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Col6a5A6H584 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a5A6H584 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a5A6H584 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Col6a5A6H584 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC11.61□□□□□ -0.55
Col6a5A6H584 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a5A6H584 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a5A6H584 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.61□□□□□ -0.55
Col6a5A6H584 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.61□□□□□ -0.55
Col6a5A6H584 CT009510.1-201ENSMUST00000227972 270 ntBASIC11.61□□□□□ -0.55
Col6a5A6H584 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a5A6H584 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a5A6H584 Gm5898-201ENSMUST00000121016 2071 ntBASIC11.61□□□□□ -0.55
Col6a5A6H584 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a5A6H584 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a5A6H584 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a5A6H584 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a5A6H584 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a5A6H584 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a5A6H584 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a5A6H584 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC11.61□□□□□ -0.55
Col6a5A6H584 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a5A6H584 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.61□□□□□ -0.55
Col6a5A6H584 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.61□□□□□ -0.55
Col6a5A6H584 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.61□□□□□ -0.55
Col6a5A6H584 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Col6a5A6H584 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a5A6H584 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a5A6H584 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC11.61□□□□□ -0.55
Col6a5A6H584 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a5A6H584 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a5A6H584 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.6□□□□□ -0.55
Col6a5A6H584 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.6□□□□□ -0.55
Col6a5A6H584 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Col6a5A6H584 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a5A6H584 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Col6a5A6H584 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.6□□□□□ -0.55
Col6a5A6H584 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a5A6H584 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC11.6□□□□□ -0.55
Col6a5A6H584 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a5A6H584 Dapk1-207ENSMUST00000226059 5009 ntBASIC11.6□□□□□ -0.55
Col6a5A6H584 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a5A6H584 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC11.6□□□□□ -0.55
Col6a5A6H584 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a5A6H584 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a5A6H584 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.6□□□□□ -0.55
Col6a5A6H584 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Col6a5A6H584 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a5A6H584 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a5A6H584 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a5A6H584 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a5A6H584 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.6□□□□□ -0.55
Col6a5A6H584 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a5A6H584 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a5A6H584 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a5A6H584 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Col6a5A6H584 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.6□□□□□ -0.55
Col6a5A6H584 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.6□□□□□ -0.55
Col6a5A6H584 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC11.6□□□□□ -0.55
Col6a5A6H584 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.6□□□□□ -0.55
Col6a5A6H584 Gm15483-201ENSMUST00000120338 456 ntBASIC11.6□□□□□ -0.55
Col6a5A6H584 Gm16026-204ENSMUST00000162652 683 ntBASIC11.6□□□□□ -0.55
Col6a5A6H584 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms