Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm14660-201ENSMUST00000119809 575 ntBASIC12.52□□□□□ -0.41
Chd6A3KFM7 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.52□□□□□ -0.41
Chd6A3KFM7 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.52□□□□□ -0.41
Chd6A3KFM7 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.52□□□□□ -0.41
Chd6A3KFM7 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.52□□□□□ -0.41
Chd6A3KFM7 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.52□□□□□ -0.41
Chd6A3KFM7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC12.52□□□□□ -0.41
Chd6A3KFM7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd6A3KFM7 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd6A3KFM7 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd6A3KFM7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd6A3KFM7 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chd6A3KFM7 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd6A3KFM7 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd6A3KFM7 Gm45606-201ENSMUST00000209836 2795 ntBASIC12.51□□□□□ -0.41
Chd6A3KFM7 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Chd6A3KFM7 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chd6A3KFM7 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chd6A3KFM7 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.51□□□□□ -0.41
Chd6A3KFM7 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.51□□□□□ -0.41
Chd6A3KFM7 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.51□□□□□ -0.41
Chd6A3KFM7 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.51□□□□□ -0.41
Chd6A3KFM7 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chd6A3KFM7 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.51□□□□□ -0.41
Chd6A3KFM7 Gm15823-201ENSMUST00000064305 670 ntBASIC12.51□□□□□ -0.41
Chd6A3KFM7 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Chd6A3KFM7 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chd6A3KFM7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chd6A3KFM7 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chd6A3KFM7 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd6A3KFM7 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd6A3KFM7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd6A3KFM7 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.51□□□□□ -0.41
Chd6A3KFM7 Gm13461-201ENSMUST00000120980 662 ntBASIC12.51□□□□□ -0.41
Chd6A3KFM7 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.51□□□□□ -0.41
Chd6A3KFM7 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chd6A3KFM7 Gm21854-201ENSMUST00000179901 471 ntBASIC12.51□□□□□ -0.41
Chd6A3KFM7 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd6A3KFM7 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd6A3KFM7 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd6A3KFM7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chd6A3KFM7 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.5□□□□□ -0.41
Chd6A3KFM7 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.5□□□□□ -0.41
Chd6A3KFM7 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.5□□□□□ -0.41
Chd6A3KFM7 Gm27731-201ENSMUST00000185192 107 ntBASIC12.5□□□□□ -0.41
Chd6A3KFM7 Gm37917-201ENSMUST00000194711 392 ntBASIC12.5□□□□□ -0.41
Chd6A3KFM7 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.5□□□□□ -0.41
Chd6A3KFM7 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd6A3KFM7 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd6A3KFM7 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd6A3KFM7 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd6A3KFM7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd6A3KFM7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Chd6A3KFM7 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd6A3KFM7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd6A3KFM7 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.5□□□□□ -0.41
Chd6A3KFM7 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd6A3KFM7 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.5□□□□□ -0.41
Chd6A3KFM7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd6A3KFM7 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.5□□□□□ -0.41
Chd6A3KFM7 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
Chd6A3KFM7 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.5□□□□□ -0.41
Chd6A3KFM7 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd6A3KFM7 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd6A3KFM7 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chd6A3KFM7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd6A3KFM7 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd6A3KFM7 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chd6A3KFM7 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd6A3KFM7 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd6A3KFM7 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.49□□□□□ -0.41
Chd6A3KFM7 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chd6A3KFM7 Gm11543-201ENSMUST00000120758 370 ntBASIC12.49□□□□□ -0.41
Chd6A3KFM7 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.49□□□□□ -0.41
Chd6A3KFM7 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.49□□□□□ -0.41
Chd6A3KFM7 Gm4857-201ENSMUST00000192718 785 ntBASIC12.49□□□□□ -0.41
Chd6A3KFM7 Gm44608-201ENSMUST00000206827 855 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms