Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC8.08□□□□□ -1.12
Ubr4A2AN08 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC8.08□□□□□ -1.12
Ubr4A2AN08 Gm12341-201ENSMUST00000119724 503 ntBASIC8.08□□□□□ -1.12
Ubr4A2AN08 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC8.08□□□□□ -1.12
Ubr4A2AN08 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Gm46209-201ENSMUST00000217912 553 ntBASIC8.08□□□□□ -1.12
Ubr4A2AN08 AC158529.1-201ENSMUST00000223618 239 ntBASIC8.08□□□□□ -1.12
Ubr4A2AN08 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Ubr4A2AN08 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC8.08□□□□□ -1.12
Ubr4A2AN08 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Ubr4A2AN08 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Gm16505-201ENSMUST00000179981 232 ntBASIC8.08□□□□□ -1.12
Ubr4A2AN08 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Gm17794-201ENSMUST00000220252 955 ntBASIC8.08□□□□□ -1.12
Ubr4A2AN08 Gm45930-201ENSMUST00000221330 292 ntBASIC8.08□□□□□ -1.12
Ubr4A2AN08 AC139580.1-202ENSMUST00000223574 928 ntBASIC8.08□□□□□ -1.12
Ubr4A2AN08 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
Ubr4A2AN08 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ubr4A2AN08 n-R5s14-201ENSMUST00000122688 107 ntBASIC8.08□□□□□ -1.12
Ubr4A2AN08 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ubr4A2AN08 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Gm45880-201ENSMUST00000213041 853 ntBASIC8.07□□□□□ -1.12
Ubr4A2AN08 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Ubr4A2AN08 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Zscan30-202ENSMUST00000224144 1458 ntBASIC8.07□□□□□ -1.12
Ubr4A2AN08 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Gm5356-201ENSMUST00000093326 615 ntBASIC8.07□□□□□ -1.12
Ubr4A2AN08 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ubr4A2AN08 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Gm12749-201ENSMUST00000122138 1159 ntBASIC8.07□□□□□ -1.12
Ubr4A2AN08 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC8.07□□□□□ -1.12
Ubr4A2AN08 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Gm9797-201ENSMUST00000052902 613 ntBASIC8.07□□□□□ -1.12
Ubr4A2AN08 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Gm5370-201ENSMUST00000187187 574 ntBASIC8.07□□□□□ -1.12
Ubr4A2AN08 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Gm19220-201ENSMUST00000222682 803 ntBASIC8.07□□□□□ -1.12
Ubr4A2AN08 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ubr4A2AN08 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ubr4A2AN08 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ubr4A2AN08 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Ubr4A2AN08 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC8.06□□□□□ -1.12
Ubr4A2AN08 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ubr4A2AN08 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC8.06□□□□□ -1.12
Ubr4A2AN08 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ubr4A2AN08 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ubr4A2AN08 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ubr4A2AN08 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ubr4A2AN08 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ubr4A2AN08 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC8.06□□□□□ -1.12
Ubr4A2AN08 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms