Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-1A0N8R0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Gm18101-201ENSMUST00000215769 548 ntBASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12d-1A0N8R0 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12d-1A0N8R0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-1A0N8R0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-1A0N8R0 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-1A0N8R0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-1A0N8R0 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-1A0N8R0 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav12d-1A0N8R0 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-1A0N8R0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-1A0N8R0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-1A0N8R0 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.48□□□□□ -0.41
Trav12d-1A0N8R0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-1A0N8R0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav12d-1A0N8R0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.48□□□□□ -0.41
Trav12d-1A0N8R0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav12d-1A0N8R0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav12d-1A0N8R0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Trav12d-1A0N8R0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-1A0N8R0 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-1A0N8R0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-1A0N8R0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav12d-1A0N8R0 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav12d-1A0N8R0 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Trav12d-1A0N8R0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Trav12d-1A0N8R0 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12d-1A0N8R0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms