Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc112A0AUP1 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc112A0AUP1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc112A0AUP1 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc112A0AUP1 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc112A0AUP1 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc112A0AUP1 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ccdc112A0AUP1 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc112A0AUP1 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc112A0AUP1 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc112A0AUP1 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc112A0AUP1 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc112A0AUP1 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ccdc112A0AUP1 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc112A0AUP1 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc112A0AUP1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc112A0AUP1 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ccdc112A0AUP1 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ccdc112A0AUP1 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ccdc112A0AUP1 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc112A0AUP1 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc112A0AUP1 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc112A0AUP1 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc112A0AUP1 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc112A0AUP1 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc112A0AUP1 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc112A0AUP1 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc112A0AUP1 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc112A0AUP1 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc112A0AUP1 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.75■□□□□ 0.43
Ccdc112A0AUP1 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc112A0AUP1 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc112A0AUP1 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.75■□□□□ 0.43
Ccdc112A0AUP1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Ccdc112A0AUP1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.75■□□□□ 0.43
Ccdc112A0AUP1 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc112A0AUP1 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc112A0AUP1 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc112A0AUP1 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc112A0AUP1 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc112A0AUP1 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc112A0AUP1 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc112A0AUP1 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Gm23634-201ENSMUST00000175071 91 ntBASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Gm8825-201ENSMUST00000182565 998 ntBASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Gm4518-201ENSMUST00000182638 718 ntBASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc112A0AUP1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Ccdc112A0AUP1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc112A0AUP1 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.73■□□□□ 0.43
Ccdc112A0AUP1 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.73■□□□□ 0.43
Ccdc112A0AUP1 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.73■□□□□ 0.43
Ccdc112A0AUP1 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc112A0AUP1 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc112A0AUP1 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.73■□□□□ 0.43
Ccdc112A0AUP1 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc112A0AUP1 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc112A0AUP1 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.73■□□□□ 0.43
Ccdc112A0AUP1 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms