Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gm18115-201ENSMUST00000221209 621 ntBASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gm13168-201ENSMUST00000121771 632 ntBASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gm36967-201ENSMUST00000193814 266 ntBASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Trav9d-4A0A0G2JG37 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav9d-4A0A0G2JG37 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav9d-4A0A0G2JG37 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Trav9d-4A0A0G2JG37 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9d-4A0A0G2JG37 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Trav9d-4A0A0G2JG37 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC10.64□□□□□ -0.71
Trav9d-4A0A0G2JG37 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Trav9d-4A0A0G2JG37 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9d-4A0A0G2JG37 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9d-4A0A0G2JG37 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9d-4A0A0G2JG37 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9d-4A0A0G2JG37 Mir1199-201ENSMUST00000117015 119 ntBASIC10.64□□□□□ -0.71
Trav9d-4A0A0G2JG37 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Trav9d-4A0A0G2JG37 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC10.64□□□□□ -0.71
Trav9d-4A0A0G2JG37 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9d-4A0A0G2JG37 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Trav9d-4A0A0G2JG37 CT025689.6-201ENSMUST00000224991 1104 ntBASIC10.64□□□□□ -0.71
Trav9d-4A0A0G2JG37 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9d-4A0A0G2JG37 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9d-4A0A0G2JG37 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Trav9d-4A0A0G2JG37 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Trav9d-4A0A0G2JG37 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav9d-4A0A0G2JG37 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9d-4A0A0G2JG37 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms