Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC11.61□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11.61□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Gm13884-201ENSMUST00000118103 829 ntBASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Gm15165-201ENSMUST00000118140 502 ntBASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Gm27867-201ENSMUST00000184778 125 ntBASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Gm11452-201ENSMUST00000122376 690 ntBASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Gm44771-201ENSMUST00000206975 626 ntBASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 AC114585.2-202ENSMUST00000228094 426 ntBASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC11.59□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trbv13-1A0A0B4J1P8 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trbv13-1A0A0B4J1P8 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv13-1A0A0B4J1P8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv13-1A0A0B4J1P8 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv13-1A0A0B4J1P8 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv13-1A0A0B4J1P8 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv13-1A0A0B4J1P8 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv13-1A0A0B4J1P8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv13-1A0A0B4J1P8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv13-1A0A0B4J1P8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC11.58□□□□□ -0.56
Trbv13-1A0A0B4J1P8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv13-1A0A0B4J1P8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC11.58□□□□□ -0.56
Trbv13-1A0A0B4J1P8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.58□□□□□ -0.56
Trbv13-1A0A0B4J1P8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms