Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm14026-201ENSMUST00000120625 1789 ntBASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv30A0A0B4J1P1 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv30A0A0B4J1P1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv30A0A0B4J1P1 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv30A0A0B4J1P1 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv30A0A0B4J1P1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv30A0A0B4J1P1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.71□□□□□ -0.53
Trbv30A0A0B4J1P1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv30A0A0B4J1P1 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv30A0A0B4J1P1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trbv30A0A0B4J1P1 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv30A0A0B4J1P1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv30A0A0B4J1P1 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv30A0A0B4J1P1 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv30A0A0B4J1P1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv30A0A0B4J1P1 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.71□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm8344-201ENSMUST00000119813 856 ntBASIC11.71□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.71□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm19164-201ENSMUST00000210667 640 ntBASIC11.71□□□□□ -0.53
Trbv30A0A0B4J1P1 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.71□□□□□ -0.53
Trbv30A0A0B4J1P1 AC127302.2-201ENSMUST00000215212 268 ntBASIC11.71□□□□□ -0.53
Trbv30A0A0B4J1P1 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv30A0A0B4J1P1 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv30A0A0B4J1P1 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv30A0A0B4J1P1 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv30A0A0B4J1P1 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv30A0A0B4J1P1 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv30A0A0B4J1P1 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv30A0A0B4J1P1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv30A0A0B4J1P1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC11.71□□□□□ -0.54
Trbv30A0A0B4J1P1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Trbv30A0A0B4J1P1 Gm42473-201ENSMUST00000201056 2291 ntBASIC11.71□□□□□ -0.54
Trbv30A0A0B4J1P1 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv30A0A0B4J1P1 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv30A0A0B4J1P1 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv30A0A0B4J1P1 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv30A0A0B4J1P1 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv30A0A0B4J1P1 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv30A0A0B4J1P1 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Gm45412-201ENSMUST00000210217 2275 ntBASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv30A0A0B4J1P1 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Gm4535-201ENSMUST00000182274 558 ntBASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Gm28659-201ENSMUST00000188013 759 ntBASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms