Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Tfap2a-203ENSMUST00000223869 2037 ntBASIC10.46□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ighv1-56A0A0A6YXG2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC10.46□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
Ighv1-56A0A0A6YXG2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Mir770-201ENSMUST00000103252 94 ntBASIC10.46□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ighv1-56A0A0A6YXG2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC10.46□□□□□ -0.73
Ighv1-56A0A0A6YXG2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC10.46□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Gm9987-201ENSMUST00000069768 567 ntBASIC10.46□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ighv1-56A0A0A6YXG2 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ighv1-56A0A0A6YXG2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC10.46□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC10.46□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gm9013-201ENSMUST00000132939 882 ntBASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms