Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav21-dv12A0A075B6C4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav21-dv12A0A075B6C4 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav21-dv12A0A075B6C4 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav21-dv12A0A075B6C4 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.96□□□□□ -0.49
Trav21-dv12A0A075B6C4 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav21-dv12A0A075B6C4 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav21-dv12A0A075B6C4 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav21-dv12A0A075B6C4 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav21-dv12A0A075B6C4 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav21-dv12A0A075B6C4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav21-dv12A0A075B6C4 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav21-dv12A0A075B6C4 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav21-dv12A0A075B6C4 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav21-dv12A0A075B6C4 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav21-dv12A0A075B6C4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav21-dv12A0A075B6C4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav21-dv12A0A075B6C4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav21-dv12A0A075B6C4 Gm15794-201ENSMUST00000120182 631 ntBASIC11.96□□□□□ -0.49
Trav21-dv12A0A075B6C4 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav21-dv12A0A075B6C4 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav21-dv12A0A075B6C4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav21-dv12A0A075B6C4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav21-dv12A0A075B6C4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC11.96□□□□□ -0.49
Trav21-dv12A0A075B6C4 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav21-dv12A0A075B6C4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav21-dv12A0A075B6C4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC11.96□□□□□ -0.49
Trav21-dv12A0A075B6C4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav21-dv12A0A075B6C4 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav21-dv12A0A075B6C4 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Trav21-dv12A0A075B6C4 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav21-dv12A0A075B6C4 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav21-dv12A0A075B6C4 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav21-dv12A0A075B6C4 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav21-dv12A0A075B6C4 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Trav21-dv12A0A075B6C4 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav21-dv12A0A075B6C4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav21-dv12A0A075B6C4 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Trav21-dv12A0A075B6C4 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Trav21-dv12A0A075B6C4 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Trav21-dv12A0A075B6C4 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav21-dv12A0A075B6C4 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav21-dv12A0A075B6C4 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav21-dv12A0A075B6C4 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav21-dv12A0A075B6C4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms