Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-5A0A075B6B9 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav6d-5A0A075B6B9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-5A0A075B6B9 Mir1668-201ENSMUST00000184114 107 ntBASIC12.56□□□□□ -0.4
Trav6d-5A0A075B6B9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav6d-5A0A075B6B9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-5A0A075B6B9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-5A0A075B6B9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-5A0A075B6B9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-5A0A075B6B9 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav6d-5A0A075B6B9 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-5A0A075B6B9 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-5A0A075B6B9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Trav6d-5A0A075B6B9 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-5A0A075B6B9 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-5A0A075B6B9 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-5A0A075B6B9 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-5A0A075B6B9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-5A0A075B6B9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-5A0A075B6B9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 Mir5122-201ENSMUST00000175004 89 ntBASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-5A0A075B6B9 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-5A0A075B6B9 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms