Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Gm7153-201ENSMUST00000117092 455 ntBASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Gm17971-201ENSMUST00000190239 806 ntBASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6d-7A0A075B6B0 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6d-7A0A075B6B0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6d-7A0A075B6B0 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6d-7A0A075B6B0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6d-7A0A075B6B0 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trav6d-7A0A075B6B0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-7A0A075B6B0 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-7A0A075B6B0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-7A0A075B6B0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-7A0A075B6B0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav6d-7A0A075B6B0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-7A0A075B6B0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav6d-7A0A075B6B0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-7A0A075B6B0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav6d-7A0A075B6B0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-7A0A075B6B0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav6d-7A0A075B6B0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav6d-7A0A075B6B0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav6d-7A0A075B6B0 Gm18421-201ENSMUST00000204122 625 ntBASIC12.02□□□□□ -0.49
Trav6d-7A0A075B6B0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-7A0A075B6B0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav6d-7A0A075B6B0 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.02□□□□□ -0.49
Trav6d-7A0A075B6B0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-7A0A075B6B0 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav6d-7A0A075B6B0 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-7A0A075B6B0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-7A0A075B6B0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav6d-7A0A075B6B0 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav6d-7A0A075B6B0 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-7A0A075B6B0 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-7A0A075B6B0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-7A0A075B6B0 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6d-7A0A075B6B0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-7A0A075B6B0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-7A0A075B6B0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-7A0A075B6B0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-7A0A075B6B0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav6d-7A0A075B6B0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-7A0A075B6B0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-7A0A075B6B0 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-7A0A075B6B0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-7A0A075B6B0 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-7A0A075B6B0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.01□□□□□ -0.49
Trav6d-7A0A075B6B0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav6d-7A0A075B6B0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-7A0A075B6B0 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.01□□□□□ -0.49
Trav6d-7A0A075B6B0 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-7A0A075B6B0 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-7A0A075B6B0 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-7A0A075B6B0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-7A0A075B6B0 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-7A0A075B6B0 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Trav6d-7A0A075B6B0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Trav6d-7A0A075B6B0 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-7A0A075B6B0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-7A0A075B6B0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-7A0A075B6B0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav6d-7A0A075B6B0 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-7A0A075B6B0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6d-7A0A075B6B0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-7A0A075B6B0 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-7A0A075B6B0 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms