Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav18A0A075B656 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav18A0A075B656 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav18A0A075B656 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav18A0A075B656 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav18A0A075B656 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav18A0A075B656 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav18A0A075B656 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.75□□□□□ -0.37
Trav18A0A075B656 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav18A0A075B656 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.75□□□□□ -0.37
Trav18A0A075B656 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav18A0A075B656 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Trav18A0A075B656 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.75□□□□□ -0.37
Trav18A0A075B656 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav18A0A075B656 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav18A0A075B656 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav18A0A075B656 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav18A0A075B656 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav18A0A075B656 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav18A0A075B656 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav18A0A075B656 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav18A0A075B656 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav18A0A075B656 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.75□□□□□ -0.37
Trav18A0A075B656 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav18A0A075B656 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Trav18A0A075B656 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav18A0A075B656 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav18A0A075B656 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav18A0A075B656 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Trav18A0A075B656 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Trav18A0A075B656 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav18A0A075B656 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav18A0A075B656 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav18A0A075B656 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav18A0A075B656 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav18A0A075B656 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav18A0A075B656 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav18A0A075B656 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav18A0A075B656 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav18A0A075B656 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav18A0A075B656 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav18A0A075B656 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav18A0A075B656 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav18A0A075B656 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav18A0A075B656 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav18A0A075B656 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav18A0A075B656 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav18A0A075B656 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav18A0A075B656 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav18A0A075B656 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav18A0A075B656 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav18A0A075B656 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Trav18A0A075B656 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav18A0A075B656 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.74□□□□□ -0.37
Trav18A0A075B656 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav18A0A075B656 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav18A0A075B656 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Gm29518-201ENSMUST00000190858 372 ntBASIC12.73□□□□□ -0.37
Trav18A0A075B656 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Gm45328-201ENSMUST00000210942 917 ntBASIC12.73□□□□□ -0.37
Trav18A0A075B656 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav18A0A075B656 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav18A0A075B656 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav18A0A075B656 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav18A0A075B656 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav18A0A075B656 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav18A0A075B656 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms