Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav5-4A0A075B652 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav5-4A0A075B652 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav5-4A0A075B652 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5-4A0A075B652 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5-4A0A075B652 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Trav5-4A0A075B652 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
Trav5-4A0A075B652 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5-4A0A075B652 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Trav5-4A0A075B652 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5-4A0A075B652 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav5-4A0A075B652 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5-4A0A075B652 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav5-4A0A075B652 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav5-4A0A075B652 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5-4A0A075B652 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5-4A0A075B652 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav5-4A0A075B652 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5-4A0A075B652 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5-4A0A075B652 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5-4A0A075B652 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Trav5-4A0A075B652 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5-4A0A075B652 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav5-4A0A075B652 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Gm13836-201ENSMUST00000121159 501 ntBASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Gm6659-201ENSMUST00000174752 547 ntBASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Mir6404-201ENSMUST00000183699 94 ntBASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav5-4A0A075B652 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav5-4A0A075B652 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5-4A0A075B652 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5-4A0A075B652 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5-4A0A075B652 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav5-4A0A075B652 Gm10676-201ENSMUST00000098778 3221 ntBASIC13□□□□□ -0.33
Trav5-4A0A075B652 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5-4A0A075B652 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav5-4A0A075B652 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5-4A0A075B652 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5-4A0A075B652 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13□□□□□ -0.33
Trav5-4A0A075B652 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5-4A0A075B652 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trav5-4A0A075B652 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav5-4A0A075B652 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5-4A0A075B652 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5-4A0A075B652 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13□□□□□ -0.33
Trav5-4A0A075B652 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5-4A0A075B652 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13□□□□□ -0.33
Trav5-4A0A075B652 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5-4A0A075B652 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Trav5-4A0A075B652 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav5-4A0A075B652 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Trav5-4A0A075B652 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5-4A0A075B652 Gm45605-201ENSMUST00000210265 4269 ntBASIC13□□□□□ -0.33
Trav5-4A0A075B652 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5-4A0A075B652 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5-4A0A075B652 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav5-4A0A075B652 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5-4A0A075B652 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav5-4A0A075B652 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav5-4A0A075B652 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-4A0A075B652 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-4A0A075B652 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-4A0A075B652 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav5-4A0A075B652 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-4A0A075B652 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-4A0A075B652 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-4A0A075B652 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-4A0A075B652 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-4A0A075B652 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav5-4A0A075B652 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-4A0A075B652 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-4A0A075B652 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.99□□□□□ -0.33
Trav5-4A0A075B652 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms