Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 AC135963.1-201ENSMUST00000211640 717 ntBASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 Gm7370-201ENSMUST00000219471 767 ntBASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav13-2A0A075B649 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13-2A0A075B649 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13-2A0A075B649 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Trav13-2A0A075B649 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13-2A0A075B649 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13-2A0A075B649 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13-2A0A075B649 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13-2A0A075B649 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13-2A0A075B649 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trav13-2A0A075B649 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13-2A0A075B649 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC10.46□□□□□ -0.73
Trav13-2A0A075B649 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13-2A0A075B649 Gm3272-201ENSMUST00000181181 1229 ntBASIC10.46□□□□□ -0.73
Trav13-2A0A075B649 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC10.46□□□□□ -0.73
Trav13-2A0A075B649 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13-2A0A075B649 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13-2A0A075B649 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13-2A0A075B649 Gm10566-201ENSMUST00000086739 996 ntBASIC10.46□□□□□ -0.73
Trav13-2A0A075B649 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13-2A0A075B649 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13-2A0A075B649 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Trav13-2A0A075B649 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-2A0A075B649 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-2A0A075B649 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Trav13-2A0A075B649 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-2A0A075B649 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC10.46□□□□□ -0.74
Trav13-2A0A075B649 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-2A0A075B649 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-2A0A075B649 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-2A0A075B649 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-2A0A075B649 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-2A0A075B649 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-2A0A075B649 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-2A0A075B649 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-2A0A075B649 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-2A0A075B649 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-2A0A075B649 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-2A0A075B649 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-2A0A075B649 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-2A0A075B649 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-2A0A075B649 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Spsb2-203ENSMUST00000112473 1322 ntBASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Gm29707-201ENSMUST00000196325 491 ntBASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Gm7213-201ENSMUST00000215977 950 ntBASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Arhgef33-211ENSMUST00000225658 473 ntBASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav13-2A0A075B649 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms