Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Gm4974-201ENSMUST00000209974 875 ntBASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav8-1A0A075B641 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Gm21596-201ENSMUST00000178049 1316 ntBASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Gm3807-201ENSMUST00000193520 1168 ntBASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 AC166341.7-201ENSMUST00000221698 126 ntBASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Dio3-201ENSMUST00000097228 1449 ntBASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav8-1A0A075B641 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav8-1A0A075B641 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav8-1A0A075B641 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav8-1A0A075B641 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav8-1A0A075B641 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav8-1A0A075B641 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trav8-1A0A075B641 Phf7-203ENSMUST00000226565 1971 ntBASIC11.16□□□□□ -0.62
Trav8-1A0A075B641 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav8-1A0A075B641 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav8-1A0A075B641 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Trav8-1A0A075B641 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav8-1A0A075B641 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav8-1A0A075B641 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Trav8-1A0A075B641 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav8-1A0A075B641 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav8-1A0A075B641 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC11.16□□□□□ -0.62
Trav8-1A0A075B641 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC11.16□□□□□ -0.62
Trav8-1A0A075B641 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav8-1A0A075B641 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav8-1A0A075B641 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav8-1A0A075B641 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trav8-1A0A075B641 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav8-1A0A075B641 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav8-1A0A075B641 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav8-1A0A075B641 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav8-1A0A075B641 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav8-1A0A075B641 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav8-1A0A075B641 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms